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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91502 Canola plasma membrane 97.67 99.21
Bra005071.1-P Field mustard plasma membrane 97.48 99.01
CDY18359 Canola plasma membrane 95.53 95.53
CDX93291 Canola plasma membrane 95.34 95.34
CDX74875 Canola plasma membrane 99.42 93.77
CDY32067 Canola golgi, plasma membrane, vacuole 20.19 92.86
AT2G38940.1 Thale cress plasma membrane 94.17 90.82
CDX74874 Canola plasma membrane 91.26 88.18
CDY62546 Canola plasma membrane 88.54 87.52
CDX91503 Canola plasma membrane 90.49 87.43
CDY07686 Canola plasma membrane 87.77 86.59
CDY13225 Canola plasma membrane 85.83 85.83
CDX76138 Canola plasma membrane 87.96 84.36
CDX73457 Canola plasma membrane 85.83 83.24
CDX78256 Canola plasma membrane 85.63 83.05
CDY14880 Canola extracellular 13.4 82.14
CDY40416 Canola plasma membrane 41.94 82.13
CDY14877 Canola vacuole 18.06 81.58
CDY40417 Canola endoplasmic reticulum, extracellular 7.57 81.25
VIT_07s0005g03290.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 82.52 80.95
CDY32949 Canola plasma membrane 69.71 79.78
CDX96884 Canola cytosol, plasma membrane, vacuole 25.63 79.52
CDY32948 Canola mitochondrion 35.53 79.22
VIT_07s0005g03300.t01 Wine grape golgi, plasma membrane, vacuole 35.53 79.22
KRH32181 Soybean extracellular 79.81 78.89
CDY43613 Canola cytosol, extracellular, golgi 21.94 78.47
CDY43612 Canola peroxisome, plasma membrane, vacuole 74.95 77.67
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 73.4 77.3
CDY60903 Canola plasma membrane 73.2 77.25
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 73.2 77.1
KRH67373 Soybean plasma membrane 80.39 76.81
KRG95659 Soybean plasma membrane 80.39 76.81
CDY32947 Canola extracellular, golgi, plastid 17.86 76.67
CDY14881 Canola plasma membrane 70.29 76.53
CDX96885 Canola plasma membrane 70.29 76.53
CDX96886 Canola plasma membrane 70.29 76.53
Solyc09g066410.1.1 Tomato endoplasmic reticulum 78.06 75.99
CDY22354 Canola golgi, plasma membrane, vacuole 68.16 75.65
CDY52378 Canola extracellular, plasma membrane 66.8 75.27
CDY32943 Canola plasma membrane 64.08 75.17
CDY22352 Canola plasma membrane 78.06 75.14
CDX95146 Canola endoplasmic reticulum, plasma membrane 64.66 75.0
CDX84703 Canola plasma membrane 41.16 74.91
CDY14879 Canola endoplasmic reticulum, golgi 19.03 74.81
Solyc06g034200.1.1 Tomato plasma membrane 77.48 74.72
CDY47815 Canola plasma membrane 47.96 73.73
CDY14883 Canola plasma membrane, vacuole 75.92 73.08
CDY71773 Canola plasma membrane 46.6 72.73
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 76.5 72.16
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 62.14 72.07
CDX96889 Canola plasma membrane, vacuole 69.9 71.57
CDY32942 Canola plasma membrane 33.4 71.07
CDY43616 Canola plasma membrane 56.89 70.77
CDY60902 Canola plasma membrane 78.64 69.71
CDX96882 Canola plasma membrane 25.83 68.91
CDY14876 Canola plasma membrane 25.83 68.91
CDX96883 Canola cytosol, peroxisome, plasma membrane 33.2 68.67
CDY50481 Canola plasma membrane 28.74 68.2
CDY32950 Canola cytosol 12.43 65.98
CDY32951 Canola mitochondrion 19.03 65.77
CDY43610 Canola mitochondrion 19.22 61.49
GSMUA_Achr4P26760_001 Banana extracellular 16.89 60.84
CDX96881 Canola mitochondrion 19.03 59.39
CDY14875 Canola mitochondrion 18.84 58.79
CDY14878 Canola cytosol 10.49 58.7
Solyc09g073010.1.1 Tomato golgi, peroxisome, plasma membrane 44.66 58.52
CDY50482 Canola extracellular, mitochondrion 6.21 56.14
CDX88277 Canola cytosol, extracellular 10.1 49.06
CDX88279 Canola plasma membrane 43.5 48.7
CDX88275 Canola extracellular, plasma membrane, vacuole 24.47 48.46
CDX87598 Canola plasma membrane 45.44 45.79
CDX87599 Canola plasma membrane 47.18 45.0
CDY31502 Canola plasma membrane 22.91 44.87
CDX88274 Canola plasma membrane 46.8 44.8
CDX68097 Canola plasma membrane 46.41 44.76
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 45.83 43.78
CDX85949 Canola plasma membrane 46.21 43.19
CDX88276 Canola golgi, plasma membrane 30.29 42.51
CDY31503 Canola plasma membrane, plastid 35.53 42.26
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 41.55 41.88
CDY29499 Canola plasma membrane, plastid 35.34 41.84
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 40.97 41.7
CDX87600 Canola plasma membrane 46.99 41.58
CDY72521 Canola plastid 20.39 37.37
CDY31501 Canola plasma membrane 20.78 37.28
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078CDF1EnsemblPlants:CDX74877ProteinID:CDX74877ProteinID:CDX74877.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005315GO:GO:0005575GO:GO:0006810
GO:GO:0006817GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00116869001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083
PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF341InterPro:Phos_permeaseSUPFAM:SSF103473TIGRFAMs:TIGR00887
TMHMM:TMhelixUniParc:UPI0004EE172ESEG:seg:::
Description
BnaA05g06230D
Coordinates
chrLK031802:-:1163880..1166437
Molecular Weight (calculated)
56144.7 Da
IEP (calculated)
8.912
GRAVY (calculated)
0.365
Length
515 amino acids
Sequence
(BLAST)
001: MAGDQLKVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVPGSA KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSVASGLSFG HEPKAVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPAPAYA
201: EDALRSTVPQ ADLVWRIILM VGAIPAAMTY YSRSKMPETA RYTALVAKDA KLAASDMSRV LQVEIEAEQE KVEEISNNKS KAFSLFSKEF MKRHGLHLLG
301: TTSTCAIGWI PPAQTMNAIQ EVFKIARAQT LIALCSTVPG YWFTVAFIDV IGRFAIQMMG FFFMTVFMFA LAIPYNHWTH KENRIGFVIM YSLTFFFANF
401: GPNATTFVVP AEIFPARFRS TCHGISAASG KLGAMVGAFG FLYLAQSPDK NKTDAGYPPG IGVRNSLLVL GVVNFLGILF TFLVPESKGK SLEEMSGENE
501: DNENTTSDSR TVPIV
Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.