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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 25.68 100.0
CDY32948 Canola mitochondrion 51.13 98.27
CDY43616 Canola plasma membrane 88.96 95.41
CDY32943 Canola plasma membrane 94.14 95.22
CDY71773 Canola plasma membrane 70.27 94.55
CDY14879 Canola endoplasmic reticulum, golgi 26.58 90.08
CDY14881 Canola plasma membrane 93.24 87.53
CDX96886 Canola plasma membrane 93.24 87.53
CDX96885 Canola plasma membrane 93.24 87.53
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 93.24 84.66
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 93.02 84.46
CDY60903 Canola plasma membrane 92.79 84.43
CDX96883 Canola cytosol, peroxisome, plasma membrane 47.07 83.94
CDY50481 Canola plasma membrane 40.09 82.03
CDY43612 Canola peroxisome, plasma membrane, vacuole 90.99 81.29
CDY32949 Canola plasma membrane 81.98 80.89
CDY52378 Canola extracellular, plasma membrane 79.28 77.02
CDY22354 Canola golgi, plasma membrane, vacuole 80.41 76.94
AT5G43360.1 Thale cress plasma membrane 87.39 74.47
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 85.81 72.71
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 85.59 72.52
CDY50482 Canola extracellular, mitochondrion 9.23 71.93
CDX95146 Canola endoplasmic reticulum, plasma membrane 71.85 71.85
CDY47815 Canola plasma membrane 51.35 68.06
CDY22352 Canola plasma membrane 81.76 67.85
CDX96884 Canola cytosol, plasma membrane, vacuole 24.77 66.27
CDY32067 Canola golgi, plasma membrane, vacuole 16.44 65.18
CDY14883 Canola plasma membrane, vacuole 77.93 64.67
CDY40416 Canola plasma membrane 38.06 64.26
CDX93291 Canola plasma membrane 73.65 63.5
CDY18359 Canola plasma membrane 73.42 63.3
KRH31705 Soybean mitochondrion 75.45 62.85
CDX91502 Canola plasma membrane 71.4 62.52
PGSC0003DMT400034874 Potato plasma membrane 73.87 62.48
VIT_05s0049g00920.t01 Wine grape plasma membrane 75.68 62.45
CDX96889 Canola plasma membrane, vacuole 70.72 62.43
CDY32951 Canola mitochondrion 20.95 62.42
CDY13225 Canola plasma membrane 72.3 62.33
Solyc03g005560.1.1 Tomato plasma membrane 74.1 62.31
Solyc03g005530.1.1 Tomato plasma membrane 74.1 62.31
PGSC0003DMT400034988 Potato plasma membrane 73.65 62.29
CDX74877 Canola plasma membrane 72.07 62.14
KRG92314 Soybean cytosol, golgi, plasma membrane 75.0 62.13
CDY60902 Canola plasma membrane 81.08 61.96
KRH69124 Soybean plasma membrane 74.32 61.91
KRH34477 Soybean extracellular 74.32 61.57
Os01t0741300-00 Rice mitochondrion 15.32 61.26
CDX73457 Canola plasma membrane 72.75 60.83
CDX78256 Canola plasma membrane 72.75 60.83
CDX74874 Canola plasma membrane 72.97 60.79
CDX76138 Canola plasma membrane 73.42 60.71
CDY62546 Canola plasma membrane 71.17 60.65
CDY07686 Canola plasma membrane 71.17 60.54
CDX91503 Canola plasma membrane 72.52 60.41
Os04t0508751-00 Rice mitochondrion 15.09 60.36
CDY32942 Canola plasma membrane 32.66 59.92
CDY43610 Canola mitochondrion 21.4 59.01
CDX74875 Canola plasma membrane 71.85 58.42
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 71.85 58.42
CDX96881 Canola mitochondrion 21.4 57.58
CDY14875 Canola mitochondrion 21.17 56.97
VIT_05s0049g00930.t01 Wine grape plasma membrane 75.23 55.48
CDY14878 Canola cytosol 11.26 54.35
CDX84703 Canola plasma membrane 33.56 52.65
CDY14880 Canola extracellular 9.91 52.38
CDY40417 Canola endoplasmic reticulum, extracellular 5.18 47.92
CDX96882 Canola plasma membrane 19.82 45.6
CDY14876 Canola plasma membrane 19.82 45.6
CDY43613 Canola cytosol, extracellular, golgi 14.19 43.75
CDY31503 Canola plasma membrane, plastid 42.34 43.42
CDY32947 Canola extracellular, golgi, plastid 11.71 43.33
CDY29499 Canola plasma membrane, plastid 42.34 43.22
CDX88279 Canola plasma membrane 44.37 42.83
CDX88276 Canola golgi, plasma membrane 34.91 42.23
CDX88277 Canola cytosol, extracellular 9.91 41.51
CDX87598 Canola plasma membrane 46.85 40.7
CDX68097 Canola plasma membrane 48.87 40.64
CDX87599 Canola plasma membrane 48.87 40.19
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 47.97 39.52
CDX88275 Canola extracellular, plasma membrane, vacuole 22.97 39.23
CDX85949 Canola plasma membrane 48.65 39.2
CDY31502 Canola plasma membrane 22.52 38.02
CDX88274 Canola plasma membrane 45.95 37.92
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 42.79 37.18
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 42.12 36.96
CDY31501 Canola plasma membrane 23.65 36.59
CDY72521 Canola plastid 22.97 36.3
CDX87600 Canola plasma membrane 46.62 35.57
CDY32950 Canola cytosol 6.53 29.9
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078H624UniProt:A0A078H624EnsemblPlants:CDY32944
ProteinID:CDY32944ProteinID:CDY32944.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00053148001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE5AD0SEG:seg
Description
BnaA09g16490DBnaA09g16490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H624]
Coordinates
chrLK032303:-:208821..210524
Molecular Weight (calculated)
48911.2 Da
IEP (calculated)
9.250
GRAVY (calculated)
0.347
Length
444 amino acids
Sequence
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLL AHFPLMSRLQ SMVWLSVGLL LVSYSSDGSV TNSEGKKSKG VMTTLCFFRF WLGFGIGGDY
101: PLSATIMSEY ANKKTRGAFI AAVFAMQGVG ILAGGFVALA VSSIFDKKFP APTYAVNRAL STPPQADYIW RIIVMFGALP AALTYYWRMK MPETARYTAL
201: VAKNIKQATQ DMSKVLQVEL EMEERAEDIV KDPRLNYGLF SKEFAKRHGL PLLGSTMNGI HEVFMIARAQ TLIALCSTVP GYWFTVAFID IMGRFAIQLM
301: GFFMMTVFMF AIAFPYDHWI KPDNRIGFVV MYSLTFFFAN FGPNATTFIV PAEIFPARLR STCHGISAAT GKAGAIVGAF GFLYAAQPQD KTKTDAGYPP
401: GIGVKNSLIM LGVINFVGML FTFLVPEPKG KSLEELSGET EVEK
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.