CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96883	Canola	cytosol, peroxisome, plasma membrane	63.04	23.29
CDY71773	Canola	plasma membrane	68.48	19.09
CDY32951	Canola	mitochondrion	30.43	18.79
CDY43610	Canola	mitochondrion	30.43	17.39
CDY40416	Canola	plasma membrane	48.91	17.11
CDY14875	Canola	mitochondrion	29.35	16.36
CDX96881	Canola	mitochondrion	29.35	16.36
CDX96889	Canola	plasma membrane, vacuole	68.48	12.52
AT5G43360.1	Thale cress	plasma membrane	70.65	12.48
CDY43612	Canola	peroxisome, plasma membrane, vacuole	66.3	12.27
CDX88277	Canola	cytosol, extracellular	14.13	12.26
CDY14883	Canola	plasma membrane, vacuole	69.57	11.96
AT5G43350.1	Thale cress	endoplasmic reticulum, plasma membrane	67.39	11.83
AT5G43370.1	Thale cress	endoplasmic reticulum, plasma membrane	67.39	11.83
CDY22352	Canola	plasma membrane	68.48	11.78
CDY43616	Canola	plasma membrane	52.17	11.59
CDY32943	Canola	plasma membrane	54.35	11.39
CDY32944	Canola	endoplasmic reticulum, golgi, plasma membrane	54.35	11.26
KRH31705	Soybean	mitochondrion	65.22	11.26
KRH69124	Soybean	plasma membrane	65.22	11.26
CDY32948	Canola	mitochondrion	28.26	11.26
CDY13225	Canola	plasma membrane	61.96	11.07
CDY47815	Canola	plasma membrane	40.22	11.04
CDY62546	Canola	plasma membrane	61.96	10.94
CDY07686	Canola	plasma membrane	61.96	10.92
CDY60902	Canola	plasma membrane	68.48	10.84
CDX76138	Canola	plasma membrane	63.04	10.8
CDX96885	Canola	plasma membrane	55.43	10.78
CDY14881	Canola	plasma membrane	55.43	10.78
CDX96886	Canola	plasma membrane	55.43	10.78
VIT_05s0049g00920.t01	Wine grape	plasma membrane	63.04	10.78
CDX73457	Canola	plasma membrane	61.96	10.73
CDX74874	Canola	plasma membrane	61.96	10.69
KRG92314	Soybean	cytosol, golgi, plasma membrane	61.96	10.63
CDX79505	Canola	cytosol, endoplasmic reticulum, plasma membrane	63.04	10.62
CDX95146	Canola	endoplasmic reticulum, plasma membrane	51.09	10.59
CDX78256	Canola	plasma membrane	60.87	10.55
CDX91503	Canola	plasma membrane	60.87	10.51
CDX93291	Canola	plasma membrane	58.7	10.49
CDX74877	Canola	plasma membrane	58.7	10.49
CDY18359	Canola	plasma membrane	58.7	10.49
PGSC0003DMT400034874	Potato	plasma membrane	59.78	10.48
PGSC0003DMT400034988	Potato	plasma membrane	59.78	10.48
CDY60903	Canola	plasma membrane	55.43	10.45
KRH34477	Soybean	extracellular	60.87	10.45
CDY50480	Canola	endoplasmic reticulum, golgi, plasma membrane	55.43	10.43
CDY22353	Canola	endoplasmic reticulum, golgi, plasma membrane	55.43	10.43
Solyc03g005560.1.1	Tomato	plasma membrane	59.78	10.42
Solyc03g005530.1.1	Tomato	plasma membrane	59.78	10.42
CDX74875	Canola	plasma membrane	58.7	9.89
CDX91502	Canola	plasma membrane	54.35	9.86
CDY50481	Canola	plasma membrane	22.83	9.68
VIT_05s0049g00930.t01	Wine grape	plasma membrane	63.04	9.63
CDY52378	Canola	extracellular, plasma membrane	44.57	8.97
CDY31501	Canola	plasma membrane	26.09	8.36
CDY32949	Canola	plasma membrane	39.13	8.0
CDY22354	Canola	golgi, plasma membrane, vacuole	38.04	7.54
CDY72521	Canola	plastid	22.83	7.47
CDY32950	Canola	cytosol	7.61	7.22
CDY31503	Canola	plasma membrane, plastid	32.61	6.93
CDY29499	Canola	plasma membrane, plastid	31.52	6.67
CDY33652	Canola	golgi, mitochondrion, plasma membrane, plastid	34.78	6.32
Os04t0508751-00	Rice	mitochondrion	7.61	6.31
Os01t0741300-00	Rice	mitochondrion	7.61	6.31
CDY14877	Canola	vacuole	7.61	6.14
CDX88279	Canola	plasma membrane	30.43	6.09
CDX96616	Canola	golgi, mitochondrion, plasma membrane, plastid	33.7	6.07
CDX88276	Canola	golgi, plasma membrane	23.91	5.99
CDX87599	Canola	plasma membrane	33.7	5.74
CDY45985	Canola	endoplasmic reticulum, plasma membrane, plastid	32.61	5.57
CDX87598	Canola	plasma membrane	29.35	5.28
CDY50482	Canola	extracellular, mitochondrion	3.26	5.26
CDX68097	Canola	plasma membrane	30.43	5.24
CDX85949	Canola	plasma membrane	30.43	5.08
CDX88274	Canola	plasma membrane	28.26	4.83
CDY14880	Canola	extracellular	4.35	4.76
CDX87600	Canola	plasma membrane	29.35	4.64
CDY32067	Canola	golgi, plasma membrane, vacuole	5.43	4.46
CDX96882	Canola	plasma membrane	8.7	4.15
CDY14876	Canola	plasma membrane	8.7	4.15
CDX84703	Canola	plasma membrane	11.96	3.89
CDX88275	Canola	extracellular, plasma membrane, vacuole	10.87	3.85
CDX96884	Canola	cytosol, plasma membrane, vacuole	6.52	3.61
CDY31502	Canola	plasma membrane	9.78	3.42
CDY32947	Canola	extracellular, golgi, plastid	4.35	3.33
CDY32942	Canola	plasma membrane	8.7	3.31
CDY14879	Canola	endoplasmic reticulum, golgi	4.35	3.05
CDY43613	Canola	cytosol, extracellular, golgi	4.35	2.78
CDY40417	Canola	endoplasmic reticulum, extracellular	1.09	2.08

Protein Annotations

EnsemblPlants:CDY14878	EnsemblPlantsGene:GSBRNA2T00084776001	PANTHER:PTHR24064	PANTHER:PTHR24064:SF414	ProteinID:CDY14878	ProteinID:CDY14878.1
UniParc:UPI0004EEF39B	UniProt:A0A078FRC6	MapMan:35.1	:	:	:

Description

BnaA02g22200DBnaA02g22200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRC6]

Coordinates

chrLK032048:-:49075..49413

Molecular Weight (calculated)

10441.8 Da

IEP (calculated)

9.067

GRAVY (calculated)

-0.014

Length

92 amino acids

Sequence
(BLAST)

1: MSKVLQVELE MEERAEDIVK DPRLNYGLFS KEFLRRHGLP LLGYIFSAIG WIPKASTMNA VHEVFKIARA QTLIATGSRL HSLISLEDLR SS

Best Arabidopsis Sequence Match ( AT5G43360.1 )
(BLAST)

001: MADQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPTSA KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIL CSVASGLSLG NSAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPSPTYE
201: QDRFLSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDLELEER VEDDVKDPKK NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNAIHEV FKIARAQTLI ALCSTVPGYW FTVAFIDIIG RFAIQLMGFF MMTVFMFAIA FPYNHWILPD
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAATGKA GAIVGAFGFL YAAQPQDKTK TDAGYPPGIG VKNSLIMLGV INFVGMLFTF
501: LVPEPKGKSL EELSGEAEVD K

Arabidopsis Description

PHT1-3Probable inorganic phosphate transporter 1-3 [Source:UniProtKB/Swiss-Prot;Acc:O48639]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.