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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 23.41 93.86
CDY14880 Canola extracellular 16.85 91.67
CDY14879 Canola endoplasmic reticulum, golgi 26.04 90.84
CDX95146 Canola endoplasmic reticulum, plasma membrane 87.53 90.09
CDX96884 Canola cytosol, plasma membrane, vacuole 32.6 89.76
Bra027463.1-P Field mustard plasma membrane 98.25 86.18
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 91.47 85.48
CDY43613 Canola cytosol, extracellular, golgi 26.91 85.42
CDY60903 Canola plasma membrane 91.03 85.25
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 91.03 85.07
CDY14881 Canola plasma membrane 87.97 84.99
CDX96886 Canola plasma membrane 87.97 84.99
CDX96885 Canola plasma membrane 87.97 84.99
CDY32949 Canola plasma membrane 83.59 84.89
CDY32947 Canola extracellular, golgi, plastid 22.1 84.17
CDY71773 Canola plasma membrane 60.61 83.94
CDY32943 Canola plasma membrane 79.87 83.14
CDY43612 Canola peroxisome, plasma membrane, vacuole 90.37 83.1
CDY32942 Canola plasma membrane 43.98 83.06
CDY22354 Canola golgi, plasma membrane, vacuole 82.71 81.47
CDY32948 Canola mitochondrion 40.7 80.52
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 77.02 79.28
CDY43616 Canola plasma membrane 70.9 78.26
AT5G43360.1 Thale cress plasma membrane 88.84 77.93
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 87.53 76.34
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 87.09 75.95
CDX84703 Canola plasma membrane 45.3 73.14
CDY47815 Canola plasma membrane 53.17 72.54
CDY32067 Canola golgi, plasma membrane, vacuole 17.51 71.43
CDX96883 Canola cytosol, peroxisome, plasma membrane 38.73 71.08
CDY22352 Canola plasma membrane 83.15 71.03
CDX96889 Canola plasma membrane, vacuole 77.24 70.18
CDY14883 Canola plasma membrane, vacuole 80.31 68.6
CDY50482 Canola extracellular, mitochondrion 8.53 68.42
CDX93291 Canola plasma membrane 76.81 68.16
CDY18359 Canola plasma membrane 76.59 67.96
CDX96882 Canola plasma membrane 28.67 67.88
CDY14876 Canola plasma membrane 28.67 67.88
CDX91502 Canola plasma membrane 74.84 67.46
CDX74877 Canola plasma membrane 75.27 66.8
VIT_05s0049g00920.t01 Wine grape plasma membrane 78.56 66.73
KRH31705 Soybean mitochondrion 77.02 66.04
KRH69124 Soybean plasma membrane 77.02 66.04
CDX74874 Canola plasma membrane 76.59 65.67
CDX91503 Canola plasma membrane 76.37 65.48
CDY13225 Canola plasma membrane 73.74 65.44
CDY60902 Canola plasma membrane 82.71 65.06
CDY50481 Canola plasma membrane 30.85 64.98
PGSC0003DMT400034988 Potato plasma membrane 74.62 64.95
PGSC0003DMT400034874 Potato plasma membrane 74.62 64.95
CDY07686 Canola plasma membrane 74.18 64.94
KRH34477 Soybean extracellular 76.15 64.93
KRG92314 Soybean cytosol, golgi, plasma membrane 76.15 64.93
CDY62546 Canola plasma membrane 73.52 64.49
Solyc03g005560.1.1 Tomato plasma membrane 74.4 64.39
Solyc03g005530.1.1 Tomato plasma membrane 74.4 64.39
CDX76138 Canola plasma membrane 75.27 64.06
CDX78256 Canola plasma membrane 74.4 64.03
CDX73457 Canola plasma membrane 74.18 63.84
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 75.49 63.19
CDX74875 Canola plasma membrane 75.05 62.82
Os01t0741300-00 Rice mitochondrion 15.1 62.16
Os04t0508751-00 Rice mitochondrion 14.88 61.26
CDY40417 Canola endoplasmic reticulum, extracellular 6.35 60.42
VIT_05s0049g00930.t01 Wine grape plasma membrane 78.56 59.63
CDY32951 Canola mitochondrion 18.16 55.7
CDY32950 Canola cytosol 11.82 55.67
CDY40416 Canola plasma membrane 31.73 55.13
CDY43610 Canola mitochondrion 18.6 52.8
CDX96881 Canola mitochondrion 18.38 50.91
CDX88275 Canola extracellular, plasma membrane, vacuole 28.67 50.38
CDY14875 Canola mitochondrion 18.16 50.3
CDY31502 Canola plasma membrane 27.57 47.91
CDX88277 Canola cytosol, extracellular 10.94 47.17
CDX88279 Canola plasma membrane 45.3 45.0
CDY14878 Canola cytosol 8.97 44.57
CDX87598 Canola plasma membrane 47.92 42.86
CDX68097 Canola plasma membrane 49.67 42.51
CDX87599 Canola plasma membrane 50.11 42.41
CDX88274 Canola plasma membrane 48.36 41.08
CDX85949 Canola plasma membrane 49.45 41.02
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 48.36 41.0
CDY31503 Canola plasma membrane, plastid 38.29 40.42
CDY29499 Canola plasma membrane, plastid 38.29 40.23
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 43.76 39.14
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 43.11 38.93
CDX87600 Canola plasma membrane 49.02 38.49
CDX88276 Canola golgi, plasma membrane 30.63 38.15
CDY31501 Canola plasma membrane 19.47 31.01
CDY72521 Canola plastid 18.6 30.25
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078ITJ1UniProt:A0A078ITJ1EnsemblPlants:CDY52378
ProteinID:CDY52378ProteinID:CDY52378.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00006817001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF2275:
Description
BnaA09g15770DBnaA09g15770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITJ1]
Coordinates
chrLK033081:+:74195..75969
Molecular Weight (calculated)
49830.5 Da
IEP (calculated)
9.384
GRAVY (calculated)
0.391
Length
457 amino acids
Sequence
(BLAST)
001: MPEKQLGVLK ALDVAKTQLY HFTAILIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPLSD KPGSLPPHVA GAVNGAALCG TLAGQLFFGW LGDKLGRKTV
101: YGITLIMMTL CSIGSGLSFG NKATGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALVVSSIF DMKFPAPTYE
201: VDRVLSTPPQ ADYVWRIIVM FGALPAVLTY YWRMKMPETA RYTALVAKNI KQAAQDMSKV LQIQLEVEER AADIMKDPRL SYGLFSKEFA KRHGYLLGIA
301: RAQSLIALCS TLMGFFMMTV FMFAIAFPYD HWTKPENRLG FVVMYSLTFF FANFGPNATT FIIPAEIFPA RLRSTCHGIS AATGKAGAIV GAFGFLYAAQ
401: PQDKTKTDAG YPPGIGIKNS LITLGVINFV GMLFTFLVPE PKGKSLEELS GENEIGT
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.