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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 22.74 99.12
CDY14879 Canola endoplasmic reticulum, golgi 25.96 98.47
CDY32948 Canola mitochondrion 45.67 98.27
CDY14880 Canola extracellular 16.5 97.62
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 95.77 97.34
CDY32949 Canola plasma membrane 88.13 97.33
CDY60903 Canola plasma membrane 95.17 96.93
CDY14881 Canola plasma membrane 92.15 96.83
CDX96885 Canola plasma membrane 92.15 96.83
CDX96886 Canola plasma membrane 92.15 96.83
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 95.17 96.73
CDY71773 Canola plasma membrane 63.78 96.06
CDX96884 Canola cytosol, plasma membrane, vacuole 31.79 95.18
CDY32943 Canola plasma membrane 83.9 94.99
Bra027487.1-P Field mustard peroxisome, plasma membrane, vacuole 99.2 94.63
CDY43613 Canola cytosol, extracellular, golgi 26.56 91.67
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 81.29 90.99
CDY22354 Canola golgi, plasma membrane, vacuole 84.91 90.95
CDY43616 Canola plasma membrane 75.45 90.58
CDY52378 Canola extracellular, plasma membrane 83.1 90.37
CDY32947 Canola extracellular, golgi, plastid 21.53 89.17
AT5G43360.1 Thale cress plasma membrane 93.16 88.87
CDX95146 Canola endoplasmic reticulum, plasma membrane 78.67 88.06
CDY32942 Canola plasma membrane 42.66 87.6
CDX96883 Canola cytosol, peroxisome, plasma membrane 43.46 86.75
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 91.15 86.45
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 90.95 86.26
CDY47815 Canola plasma membrane 57.75 85.67
CDY50481 Canola plasma membrane 35.41 81.11
CDY22352 Canola plasma membrane 86.52 80.37
CDY14883 Canola plasma membrane, vacuole 83.3 77.38
CDX93291 Canola plasma membrane 78.87 76.12
CDX96889 Canola plasma membrane, vacuole 76.86 75.94
CDY18359 Canola plasma membrane 78.67 75.92
CDX91502 Canola plasma membrane 76.86 75.35
CDX74877 Canola plasma membrane 77.67 74.95
KRH31705 Soybean mitochondrion 79.68 74.3
CDY13225 Canola plasma membrane 76.66 73.98
VIT_05s0049g00920.t01 Wine grape plasma membrane 79.68 73.61
KRH69124 Soybean plasma membrane 78.87 73.55
PGSC0003DMT400034874 Potato plasma membrane 77.67 73.52
PGSC0003DMT400034988 Potato plasma membrane 77.67 73.52
CDY60902 Canola plasma membrane 85.92 73.49
Solyc03g005530.1.1 Tomato plasma membrane 77.87 73.3
Solyc03g005560.1.1 Tomato plasma membrane 77.87 73.3
KRG92314 Soybean cytosol, golgi, plasma membrane 78.87 73.13
CDX74874 Canola plasma membrane 78.27 72.98
KRH34477 Soybean extracellular 78.47 72.76
CDY62546 Canola plasma membrane 76.26 72.74
CDY07686 Canola plasma membrane 76.26 72.61
CDX91503 Canola plasma membrane 77.67 72.42
CDX84703 Canola plasma membrane 41.05 72.08
CDX76138 Canola plasma membrane 77.87 72.07
CDX73457 Canola plasma membrane 76.66 71.75
CDX78256 Canola plasma membrane 76.66 71.75
CDY32067 Canola golgi, plasma membrane, vacuole 16.1 71.43
CDX74875 Canola plasma membrane 77.46 70.51
CDY50482 Canola extracellular, mitochondrion 8.05 70.18
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 76.26 69.41
CDY14876 Canola plasma membrane 26.56 68.39
CDX96882 Canola plasma membrane 26.56 68.39
CDY40416 Canola plasma membrane 35.61 67.3
CDY32951 Canola mitochondrion 20.12 67.11
CDY40417 Canola endoplasmic reticulum, extracellular 6.44 66.67
CDY14878 Canola cytosol 12.27 66.3
VIT_05s0049g00930.t01 Wine grape plasma membrane 79.48 65.61
CDY43610 Canola mitochondrion 20.52 63.35
Os01t0741300-00 Rice mitochondrion 13.68 61.26
CDY32950 Canola cytosol 11.87 60.82
CDX96881 Canola mitochondrion 20.12 60.61
Os04t0508751-00 Rice mitochondrion 13.48 60.36
CDY14875 Canola mitochondrion 19.92 60.0
CDX88275 Canola extracellular, plasma membrane, vacuole 26.16 50.0
CDX88279 Canola plasma membrane 45.88 49.57
CDX88277 Canola cytosol, extracellular 10.46 49.06
CDY31502 Canola plasma membrane 25.35 47.91
CDX87598 Canola plasma membrane 47.28 45.99
CDX68097 Canola plasma membrane 49.09 45.69
CDX87599 Canola plasma membrane 49.5 45.56
CDY31503 Canola plasma membrane, plastid 39.03 44.8
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 48.49 44.71
CDY29499 Canola plasma membrane, plastid 38.83 44.37
CDX85949 Canola plasma membrane 48.89 44.1
CDX88274 Canola plasma membrane 47.28 43.68
CDX88276 Canola golgi, plasma membrane 31.39 42.51
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 42.86 42.09
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 43.26 42.07
CDX87600 Canola plasma membrane 47.89 40.89
CDY31501 Canola plasma membrane 21.33 36.93
CDY72521 Canola plastid 20.72 36.65
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078I0I6UniProt:A0A078I0I6EnsemblPlants:CDY43612
ProteinID:CDY43612ProteinID:CDY43612.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00076929001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE7817SEG:seg
Description
BnaC09g17510DBnaC09g17510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0I6]
Coordinates
chrLK032562:-:174650..176628
Molecular Weight (calculated)
54530.3 Da
IEP (calculated)
9.464
GRAVY (calculated)
0.378
Length
497 amino acids
Sequence
(BLAST)
001: MAEEQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPLSE KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGVTLIMMIL CSVASGLSFG NKAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGIGILAGG FVGLAVSSIF DKKFPSPTYA
201: VNRALSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNL KQATQDMSKV LQVELEMEER EEDILKDPRL NYGLFSKEFL KRHGLPLLGS
301: IGWIPKASTM NAIHEVFKIA RAQTLIALCS TVPGYWFTVA FIDIMGRFAI QLMGFFMMTV FMFAIAFPYD HWIKPDNRIG FVVMYSLTFF FANFGPNATT
401: FIVPAEIFPA RLRSTCHGIS AATGKAGAIV GAFGFLYAAQ PQDKTKTDAG YPPGIGVKNS LIMLGVINFV GMLFTFLVPE PKGKSLEELS GETEAEK
Best Arabidopsis Sequence Match ( AT5G43360.1 )
(BLAST)
001: MADQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPTSA KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIL CSVASGLSLG NSAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPSPTYE
201: QDRFLSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDLELEER VEDDVKDPKK NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNAIHEV FKIARAQTLI ALCSTVPGYW FTVAFIDIIG RFAIQLMGFF MMTVFMFAIA FPYNHWILPD
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAATGKA GAIVGAFGFL YAAQPQDKTK TDAGYPPGIG VKNSLIMLGV INFVGMLFTF
501: LVPEPKGKSL EELSGEAEVD K
Arabidopsis Description
PHT1-3Probable inorganic phosphate transporter 1-3 [Source:UniProtKB/Swiss-Prot;Acc:O48639]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.