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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87598 Canola plasma membrane 86.3 77.69
CDX88275 Canola extracellular, plasma membrane, vacuole 43.7 77.31
Bra015745.1-P Field mustard golgi, plasma membrane 87.83 77.1
CDX88274 Canola plasma membrane 84.13 71.93
AT1G76430.1 Thale cress golgi, plasma membrane, vacuole 81.09 70.11
CDX87599 Canola plasma membrane 82.17 70.0
CDX68097 Canola plasma membrane 80.87 69.66
CDX88276 Canola golgi, plasma membrane 55.43 69.48
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 80.43 68.65
CDX85949 Canola plasma membrane 81.09 67.7
CDY31502 Canola plasma membrane 38.48 67.3
CDX87600 Canola plasma membrane 83.91 66.32
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 69.13 62.85
CDY31503 Canola plasma membrane, plastid 58.91 62.59
CDY29499 Canola plasma membrane, plastid 58.7 62.07
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 68.7 61.84
CDY72521 Canola plastid 37.39 61.21
CDX88277 Canola cytosol, extracellular 13.48 58.49
PGSC0003DMT400025887 Potato cytosol, peroxisome, plasma membrane 61.96 55.99
CDY50482 Canola extracellular, mitochondrion 6.74 54.39
CDX96884 Canola cytosol, plasma membrane, vacuole 19.57 54.22
KRG89401 Soybean golgi, mitochondrion, plasma membrane, plastid 59.57 54.15
CDY31501 Canola plasma membrane 33.7 54.01
KRH50469 Soybean golgi, mitochondrion, plasma membrane, plastid 59.35 53.42
VIT_18s0122g00780.t01 Wine grape cytosol, peroxisome, plasma membrane 60.43 52.65
CDY14879 Canola endoplasmic reticulum, golgi 14.78 51.91
CDX84703 Canola plasma membrane 29.78 48.41
CDX96882 Canola plasma membrane 20.22 48.19
CDY14876 Canola plasma membrane 20.22 48.19
GSMUA_Achr3P03730_001 Banana cytosol, golgi, plasma membrane 50.0 47.62
CDY32947 Canola extracellular, golgi, plastid 12.39 47.5
CDY32949 Canola plasma membrane 46.09 47.11
CDY14880 Canola extracellular 8.48 46.43
CDY32943 Canola plasma membrane 43.91 46.01
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 48.91 46.01
CDY60903 Canola plasma membrane 48.7 45.9
CDY43612 Canola peroxisome, plasma membrane, vacuole 49.57 45.88
Os06t0325200-01 Rice cytosol 55.0 45.83
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 48.7 45.81
CDY52378 Canola extracellular, plasma membrane 45.0 45.3
CDX96885 Canola plasma membrane 46.52 45.24
CDY14881 Canola plasma membrane 46.52 45.24
CDX96886 Canola plasma membrane 46.52 45.24
CDY07686 Canola plasma membrane 51.3 45.21
CDY22354 Canola golgi, plasma membrane, vacuole 45.43 45.04
CDY32942 Canola plasma membrane 23.7 45.04
CDY32948 Canola mitochondrion 22.61 45.02
CDX91503 Canola plasma membrane 51.74 44.65
CDX74874 Canola plasma membrane 51.74 44.65
CDX91502 Canola plasma membrane 48.91 44.38
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 42.83 44.37
CDY62546 Canola plasma membrane 50.22 44.34
CDY13225 Canola plasma membrane 49.57 44.27
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 55.0 44.15
TraesCS7A01G226600.1 Wheat plasma membrane 54.13 44.15
TraesCS7B01G193000.2 Wheat plasma membrane 53.91 43.97
TraesCS7D01G227800.1 Wheat plasma membrane 53.7 43.79
CDY43613 Canola cytosol, extracellular, golgi 13.7 43.75
CDY32067 Canola golgi, plasma membrane, vacuole 10.65 43.75
CDX95146 Canola endoplasmic reticulum, plasma membrane 42.17 43.69
CDX74877 Canola plasma membrane 48.7 43.5
CDX78256 Canola plasma membrane 50.0 43.31
CDY18359 Canola plasma membrane 48.48 43.3
CDX93291 Canola plasma membrane 48.48 43.3
CDX73457 Canola plasma membrane 49.78 43.13
HORVU0Hr1G020720.1 Barley peroxisome, plasma membrane, plastid 52.61 42.83
CDY22352 Canola plasma membrane 49.78 42.8
Os06t0324800-01 Rice mitochondrion, plasma membrane 54.13 42.78
CDX76138 Canola plasma membrane 49.57 42.46
CDY14883 Canola plasma membrane, vacuole 49.35 42.43
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 50.22 42.31
CDY40416 Canola plasma membrane 23.91 41.83
CDY43616 Canola plasma membrane 37.61 41.79
CDY40417 Canola endoplasmic reticulum, extracellular 4.35 41.67
CDX74875 Canola plasma membrane 48.91 41.21
CDY71773 Canola plasma membrane 29.35 40.91
CDX96889 Canola plasma membrane, vacuole 44.35 40.56
CDY60902 Canola plasma membrane 49.78 39.41
GSMUA_Achr4P09810_001 Banana peroxisome, plasma membrane, plastid 34.35 38.35
CDY47815 Canola plasma membrane 27.61 37.91
CDY32951 Canola mitochondrion 11.74 36.24
CDY32950 Canola cytosol 7.61 36.08
CDY14877 Canola vacuole 8.7 35.09
CDX96883 Canola cytosol, peroxisome, plasma membrane 18.91 34.94
CDY14875 Canola mitochondrion 12.39 34.55
CDX96881 Canola mitochondrion 12.17 33.94
CDY50481 Canola plasma membrane 15.65 33.18
CDY43610 Canola mitochondrion 11.52 32.92
CDY14878 Canola cytosol 6.09 30.43
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078DID9EnsemblPlants:CDX88279ProteinID:CDX88279ProteinID:CDX88279.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00147775001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR24064
PANTHER:PTHR24064:SF210SUPFAM:SSF103473InterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI0004EEB419SEG:seg
Description
BnaC06g37230D
Coordinates
chrLK031855:-:134603..137189
Molecular Weight (calculated)
50948.4 Da
IEP (calculated)
9.339
GRAVY (calculated)
0.438
Length
460 amino acids
Sequence
(BLAST)
001: MPAPRVLSAL DVARIQLYHF KAIVIAGMSL FTDAYDLFCI APVLKMLSQI YYKKDSVGTP LLSTFYAIAL LGAALGQLFV GYLGDRLGRR RVYGICLMIM
101: VLSSFGCGFS VCTTRRSCVM ASLGFFRFFL GLGIGGDYPL SATIMSEFAN KRSRGTFISA VFSMQGLGIL MSSAVTMSVC SAFKKAGERS SEKTRAEESD
201: IAWRLILMIG AIPAALTFYW RMRMPETARY TALVEKNAVQ AEKDMQKVMS ISEIDEDFRE EPHTSTCSYK LFSRRFFSLH GLDLFAASAN WFLVDVVFYT
301: SNLLLSQIVS LSNKPSSTAN VYDSAFEAAK VAAIVAACST IPGYWFTVYF IDRIGRVKIQ IMGFFFMAVV YLAAGIPYSW YWLHEKTNNK GFMILYGSIF
401: FFSNFGPNTT TFIVPAELFP ARFRSTCHGI SGAFGKLGAI AGTVGSRFLS LGAFVSLECW
Best Arabidopsis Sequence Match ( AT1G20860.1 )
(BLAST)
001: MPIKVLSSLD VARTQWYHFK AIIVAGMGLF TDAYDLFCIA PVMKMISHVY YNGDSINTAV LSTSYAIALL GTATGQLVFG YLGDRVGRRR VYGLCLIIMI
101: LSSFGCGFSV CTTRRSCVMV SLGFFRFFLG LGIGGDYPLS ATIMSEFANK RTRGAFIAAV FSMQGLGILV SSAVTMAVCV AFKRSGGGLE VDAAAPTEAD
201: LAWRLILMIG ALPAALTFYW RMLMPETARY TALVENNIVQ AAKDMQRVMS RSHISDEATT DPPPPPPPPS YKLFSRCFFR LHGRDLFAAS FNWFLVDIVF
301: YTSNLLLSHI FSHYSKKPST AENVYDAAFE VAELGAIIAA CSTIPGYWFT VYFIDKIGRV KIQIMGFFFM AVIYLVAGIP YSWYWSKHEH NNKGFMVLYG
401: LVFFFCNFGP NTTTFIIPAE HFPARFRSTC HGISGAAGKL GAIVGTVGFL WATKKMESDD KNQIYPEVNR MRIAFLILGG VCIAGILVTY FFTKETMGRS
501: LEENEHDQDN NAESEDEPQI VDGQSSVSTL LQTR
Arabidopsis Description
PHT1;8phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.