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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14877 Canola vacuole 45.78 100.0
CDY32948 Canola mitochondrion 68.27 73.59
CDY50481 Canola plasma membrane 62.65 71.89
CDY71773 Canola plasma membrane 88.75 66.97
CDY14878 Canola cytosol 23.29 63.04
CDY32951 Canola mitochondrion 36.95 61.74
CDY40416 Canola plasma membrane 63.05 59.7
CDY43610 Canola mitochondrion 37.35 57.76
CDX96881 Canola mitochondrion 36.95 55.76
CDY14875 Canola mitochondrion 36.55 55.15
CDY43616 Canola plasma membrane 83.53 50.24
CDY47815 Canola plasma membrane 67.47 50.15
CDY32943 Canola plasma membrane 83.94 47.61
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 83.94 47.07
CDY14881 Canola plasma membrane 83.53 43.97
CDX96886 Canola plasma membrane 83.53 43.97
CDX96885 Canola plasma membrane 83.53 43.97
CDY43612 Canola peroxisome, plasma membrane, vacuole 86.75 43.46
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 83.53 42.54
CDY60903 Canola plasma membrane 83.13 42.42
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 83.13 42.33
CDY22352 Canola plasma membrane 87.15 40.56
CDY52378 Canola extracellular, plasma membrane 71.08 38.73
CDY14883 Canola plasma membrane, vacuole 83.13 38.69
CDX95146 Canola endoplasmic reticulum, plasma membrane 67.87 38.06
CDX96889 Canola plasma membrane, vacuole 75.9 37.57
CDY32949 Canola plasma membrane 67.87 37.56
CDY60902 Canola plasma membrane 86.75 37.18
CDY13225 Canola plasma membrane 76.31 36.89
CDX74874 Canola plasma membrane 78.31 36.59
CDX76138 Canola plasma membrane 78.31 36.31
CDX91503 Canola plasma membrane 77.51 36.21
CDX73457 Canola plasma membrane 76.71 35.97
CDY31501 Canola plasma membrane 41.37 35.89
CDX78256 Canola plasma membrane 75.9 35.59
CDY62546 Canola plasma membrane 73.9 35.32
CDY72521 Canola plastid 39.76 35.23
CDY22354 Canola golgi, plasma membrane, vacuole 65.06 34.91
CDY07686 Canola plasma membrane 73.09 34.87
CDX93291 Canola plasma membrane 71.49 34.56
CDY18359 Canola plasma membrane 71.08 34.37
CDX74877 Canola plasma membrane 68.67 33.2
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 72.69 33.15
CDX91502 Canola plasma membrane 65.86 32.35
CDX74875 Canola plasma membrane 68.67 31.32
AT5G43340.1 Thale cress plasma membrane 61.45 29.65
Bra035976.1-P Field mustard plasma membrane 60.64 29.21
CDX88276 Canola golgi, plasma membrane 38.15 25.89
CDY31503 Canola plasma membrane, plastid 41.77 24.02
CDY29499 Canola plasma membrane, plastid 41.77 23.91
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 40.96 19.96
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 40.16 19.76
CDX68097 Canola plasma membrane 41.77 19.48
CDX87599 Canola plasma membrane 41.77 19.26
CDX87598 Canola plasma membrane 39.36 19.18
CDX88279 Canola plasma membrane 34.94 18.91
CDX85949 Canola plasma membrane 41.37 18.69
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 39.76 18.37
CDX88274 Canola plasma membrane 38.96 18.03
CDX87600 Canola plasma membrane 39.76 17.01
CDX88277 Canola cytosol, extracellular 5.62 13.21
AT4G08878.1 Thale cress plasma membrane 6.83 6.07
CDY50482 Canola extracellular, mitochondrion 1.2 5.26
CDY40417 Canola endoplasmic reticulum, extracellular 0.8 4.17
CDY32950 Canola cytosol 1.2 3.09
CDX88275 Canola extracellular, plasma membrane, vacuole 1.61 1.54
CDY31502 Canola plasma membrane 1.2 1.14
CDX84703 Canola plasma membrane 1.2 1.06
CDX96882 Canola plasma membrane 0.4 0.52
CDY14876 Canola plasma membrane 0.4 0.52
CDY32942 Canola plasma membrane 0.4 0.41
CDY43613 Canola cytosol, extracellular, golgi 0.0 0.0
CDX96884 Canola cytosol, plasma membrane, vacuole 0.0 0.0
CDY32947 Canola extracellular, golgi, plastid 0.0 0.0
CDY14879 Canola endoplasmic reticulum, golgi 0.0 0.0
CDY32067 Canola golgi, plasma membrane, vacuole 0.0 0.0
CDY14880 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078EBX0EnsemblPlants:CDX96883ProteinID:CDX96883
ProteinID:CDX96883.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00103759001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PANTHER:PTHR24064PANTHER:PTHR24064:SF414
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE998D:::
Description
BnaC02g30210D
Coordinates
chrLK031896:-:20288..21063
Molecular Weight (calculated)
27658.9 Da
IEP (calculated)
8.063
GRAVY (calculated)
0.276
Length
249 amino acids
Sequence
(BLAST)
001: MSKVLQVELE MEERAEDIVK DPRLNYGLFS KEFLRRHGLP LLGCTSTWFL LDIAFYSQNL FQKDIFSAIG WIPKASTMNA VHEVFKIARA QTLIATGSRF
101: AIQLMGFFMM TVFMFAIAFP YDHCIKPDNR IGFVVMYSLT FFFANFGPNA TTFIVPAEIF PARLRSTCHG ISAATGKAGA IVGAFGFLYA AQPQDKTKTD
201: AGYPPGIGVK NSLIMLGVIN FVGMLFTFLV PEPKGKSLEE LSGETEVEK
Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)
001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA
Arabidopsis Description
PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.