Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 1
- plasma membrane 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14876 | Canola | plasma membrane | 51.43 | 74.61 |
| CDX96882 | Canola | plasma membrane | 51.43 | 74.61 |
| CDY14879 | Canola | endoplasmic reticulum, golgi | 33.93 | 72.52 |
| CDX96884 | Canola | cytosol, plasma membrane, vacuole | 35.36 | 59.64 |
| CDY32950 | Canola | cytosol | 20.0 | 57.73 |
| AT5G43340.1 | Thale cress | plasma membrane | 81.43 | 44.19 |
| Bra035976.1-P | Field mustard | plasma membrane | 77.14 | 41.78 |
| Bra027486.1-P | Field mustard | plasma membrane | 76.07 | 41.76 |
| CDY14880 | Canola | extracellular | 12.5 | 41.67 |
| AT3G54700.1 | Thale cress | plasma membrane | 66.07 | 34.58 |
| AT5G43360.1 | Thale cress | plasma membrane | 64.29 | 34.55 |
| AT5G43370.1 | Thale cress | endoplasmic reticulum, plasma membrane | 64.64 | 34.54 |
| AT5G43350.1 | Thale cress | endoplasmic reticulum, plasma membrane | 64.64 | 34.54 |
| AT2G38940.1 | Thale cress | plasma membrane | 63.93 | 33.52 |
| AT2G32830.1 | Thale cress | plasma membrane | 63.57 | 32.84 |
| AT1G76430.1 | Thale cress | golgi, plasma membrane, vacuole | 46.07 | 24.25 |
| AT1G20860.2 | Thale cress | cytosol, mitochondrion, plasma membrane | 46.07 | 22.01 |
| AT4G08895.1 | Thale cress | mitochondrion | 4.64 | 8.39 |
| CDX96883 | Canola | cytosol, peroxisome, plasma membrane | 6.07 | 6.83 |
| CDY14877 | Canola | vacuole | 2.14 | 5.26 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.6 | MapMan:25.3.2.1 | EntrezGene:826464 | ProteinID:AEE82692.1 | ArrayExpress:AT4G08878 |
| EnsemblPlantsGene:AT4G08878 | RefSeq:AT4G08878 | TAIR:AT4G08878 | RefSeq:AT4G08878-TAIR-G | EnsemblPlants:AT4G08878.1 | TAIR:AT4G08878.1 |
| Unigene:At.54219 | UniProt:F4JJ77 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf |
| RefSeq:NP_680668.1 | PFAM:PF00083 | PFscan:PS50850 | PANTHER:PTHR24064 | PANTHER:PTHR24064:SF331 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI0000162A01 | SEG:seg | : | : | : |
Description
Major facilitator superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJ77]
Coordinates
chr4:+:5683180..5684022
Molecular Weight (calculated)
30902.7 Da
IEP (calculated)
9.054
GRAVY (calculated)
0.384
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPFHGGCSR RYGFFTDSYD LFVISLITKL LGRIYYQVPG SSSPGSLPDG ISVAVSGVAF AGTFLGQIFF GCLGDKLGRK RVYGLTLLIM TICSIASSLS
101: FGKDPKTVMV TLCFFRFWLG FGIGGDYPLS ATIMFEYANK RTRGAFIASV FAMQGVGILA AGGVSLLVSY LFEIEFPSRA YILDGAASTV PQADYVWRII
201: LMVGALPALL TYYWRMKMPE TARYTALVAK NAEQAALDMN KEIFTEVDEK RFALTICQSE NWFSRFVFSF NFGPNYPGKT
101: FGKDPKTVMV TLCFFRFWLG FGIGGDYPLS ATIMFEYANK RTRGAFIASV FAMQGVGILA AGGVSLLVSY LFEIEFPSRA YILDGAASTV PQADYVWRII
201: LMVGALPALL TYYWRMKMPE TARYTALVAK NAEQAALDMN KEIFTEVDEK RFALTICQSE NWFSRFVFSF NFGPNYPGKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.