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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14880 Canola extracellular 51.55 59.52
CDY32947 Canola extracellular, golgi, plastid 55.67 45.0
CDY14876 Canola plasma membrane 77.32 38.86
CDX96882 Canola plasma membrane 77.32 38.86
CDY43613 Canola cytosol, extracellular, golgi 55.67 37.5
CDX96884 Canola cytosol, plasma membrane, vacuole 46.39 27.11
CDX88277 Canola cytosol, extracellular 27.84 25.47
CDY32942 Canola plasma membrane 55.67 22.31
AT4G08878.1 Thale cress plasma membrane 57.73 20.0
CDX84703 Canola plasma membrane 57.73 19.79
Bra027486.1-P Field mustard plasma membrane 96.91 18.43
CDY47815 Canola plasma membrane 57.73 16.72
AT5G43340.1 Thale cress plasma membrane 82.47 15.5
CDX88275 Canola extracellular, plasma membrane, vacuole 36.08 13.46
CDY32949 Canola plasma membrane 58.76 12.67
CDX91502 Canola plasma membrane 65.98 12.62
CDY18359 Canola plasma membrane 65.98 12.43
CDX93291 Canola plasma membrane 65.98 12.43
CDX74877 Canola plasma membrane 65.98 12.43
CDX95146 Canola endoplasmic reticulum, plasma membrane 55.67 12.16
CDY07686 Canola plasma membrane 64.95 12.07
CDY62546 Canola plasma membrane 63.92 11.9
CDY43612 Canola peroxisome, plasma membrane, vacuole 60.82 11.87
CDX73457 Canola plasma membrane 64.95 11.86
CDX78256 Canola plasma membrane 64.95 11.86
CDY22354 Canola golgi, plasma membrane, vacuole 56.7 11.85
CDY13225 Canola plasma membrane 62.89 11.84
CDY52378 Canola extracellular, plasma membrane 55.67 11.82
CDY31502 Canola plasma membrane 31.96 11.79
CDX74875 Canola plasma membrane 65.98 11.72
CDY60903 Canola plasma membrane 58.76 11.68
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 58.76 11.66
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 58.76 11.66
CDX76138 Canola plasma membrane 63.92 11.55
CDX74874 Canola plasma membrane 62.89 11.44
CDX91503 Canola plasma membrane 62.89 11.44
CDX96889 Canola plasma membrane, vacuole 58.76 11.33
CDX96886 Canola plasma membrane 53.61 10.99
CDX96885 Canola plasma membrane 53.61 10.99
CDY14881 Canola plasma membrane 53.61 10.99
CDY22352 Canola plasma membrane 59.79 10.84
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 60.82 10.81
CDY14883 Canola plasma membrane, vacuole 58.76 10.65
CDY60902 Canola plasma membrane 60.82 10.15
CDY32943 Canola plasma membrane 40.21 8.88
CDY14878 Canola cytosol 7.22 7.61
CDX88279 Canola plasma membrane 36.08 7.61
CDX88274 Canola plasma membrane 38.14 6.88
CDX87599 Canola plasma membrane 38.14 6.85
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 35.05 6.72
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 35.05 6.65
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 29.9 6.53
CDX68097 Canola plasma membrane 35.05 6.37
CDX87600 Canola plasma membrane 38.14 6.36
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 35.05 6.31
CDX87598 Canola plasma membrane 32.99 6.26
CDX85949 Canola plasma membrane 35.05 6.17
CDY32951 Canola mitochondrion 9.28 6.04
CDY43610 Canola mitochondrion 9.28 5.59
CDX96881 Canola mitochondrion 9.28 5.45
CDY14875 Canola mitochondrion 9.28 5.45
CDY43616 Canola plasma membrane 11.34 2.66
CDY14877 Canola vacuole 2.06 1.75
CDY40416 Canola plasma membrane 4.12 1.52
CDX96883 Canola cytosol, peroxisome, plasma membrane 3.09 1.2
CDY50481 Canola plasma membrane 2.06 0.92
CDY71773 Canola plasma membrane 3.09 0.91
CDY32948 Canola mitochondrion 2.06 0.87
CDY72521 Canola plastid 2.06 0.71
CDY31501 Canola plasma membrane 2.06 0.7
CDX88276 Canola golgi, plasma membrane 2.06 0.54
CDY31503 Canola plasma membrane, plastid 2.06 0.46
CDY29499 Canola plasma membrane, plastid 2.06 0.46
CDY50482 Canola extracellular, mitochondrion 0.0 0.0
CDY40417 Canola endoplasmic reticulum, extracellular 0.0 0.0
CDY32067 Canola golgi, plasma membrane, vacuole 0.0 0.0
CDY14879 Canola endoplasmic reticulum, golgi 0.0 0.0
Protein Annotations
EnsemblPlants:CDY32950EnsemblPlantsGene:GSBRNA2T00053157001Gene3D:1.20.1250.20GO:A0A078H2X3GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:MFS_trans_sfPANTHER:PTHR24064PANTHER:PTHR24064:SF331ProteinID:CDY32950ProteinID:CDY32950.1
SEG:segSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF381FUniProt:A0A078H2X3MapMan:24.2.2.6
MapMan:25.3.2.1:::::
Description
BnaA09g16430DBnaA09g16430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2X3]
Coordinates
chrLK032303:+:292282..293027
Molecular Weight (calculated)
10500.6 Da
IEP (calculated)
7.895
GRAVY (calculated)
0.393
Length
97 amino acids
Sequence
(BLAST)
1: MAKQEHSSIL EALDVKKVTW YHVTTVIISG MGFFTDSYDL FVISLVTKLL GRIYYHHPGS SSPGSLPDGI SAAVSGVAFA GTFIGQIFFG SLHFSSR
Best Arabidopsis Sequence Match ( AT5G43340.1 )
(BLAST)
001: MANEEQGSIL KALDVAKTQW YHVTAVVVSG MGFFTDSYDL FVISLITKLL GRIYYQVPGS SSPGSLPDGI SAAVSGVAFA GTFIGQIFFG CLGDKLGRKR
101: VYGLTLLIMT ICSICSGLSL GRDPKTVMVT LCFFRFWLGF GIGGDYPLSA TIMSEYSNKR TRGAFIAAVF GMQGIGILAA GAVSLLVSAV FESKFPSRAY
201: ILDGAASTVP QADYVWRIIL MVGALPALLT YYWRMKMPET ARYTALVSKN AEQAALDMTK VLNVDIEASA AKNDQARVSS DEFGLFSMKF LRRHGLHLLG
301: TASTWFLLDI AFYSQNLFQK DIFTTIGWLP SAKTMNAIQE LYMIAKAQTI IACCSTVPGY FFTVGFIDYM GRKKIQIMGF AMMTIFMLSL AIPYHHWTLP
401: ANRIGFVVLY SFTFFFSNFG PNATTFIVPA EIFPARIRST CHGISAASGK AGAMVGSFGF SALVKALGMS NTLYIMAGIN LLGLLLTFTI PETNGKSLEE
501: LSGETEPEKI KEKIVV
Arabidopsis Description
PHT1-6Probable inorganic phosphate transporter 1-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.