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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • cytosol 1
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72521 Canola plastid 57.49 75.09
CDX87598 Canola plasma membrane 89.65 64.38
CDY31501 Canola plasma membrane 49.86 63.76
CDY31503 Canola plasma membrane, plastid 70.84 60.05
Bra015745.1-P Field mustard golgi, plasma membrane 85.56 59.92
CDY29499 Canola plasma membrane, plastid 70.84 59.77
CDY50482 Canola extracellular, mitochondrion 8.99 57.89
CDX87599 Canola plasma membrane 82.02 55.74
CDX88279 Canola plasma membrane 69.48 55.43
CDX68097 Canola plasma membrane 80.65 55.43
CDX88274 Canola plasma membrane 81.2 55.39
AT1G76430.1 Thale cress golgi, plasma membrane, vacuole 79.84 55.08
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 80.65 54.92
CDX85949 Canola plasma membrane 80.93 53.9
CDX87600 Canola plasma membrane 82.83 52.23
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 69.48 50.4
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 70.03 50.29
CDY32948 Canola mitochondrion 31.34 49.78
CDY14877 Canola vacuole 14.99 48.25
CDY40416 Canola plasma membrane 32.7 45.63
CDY71773 Canola plasma membrane 39.24 43.64
KRH50469 Soybean golgi, mitochondrion, plasma membrane, plastid 59.4 42.66
KRG89401 Soybean golgi, mitochondrion, plasma membrane, plastid 57.49 41.7
PGSC0003DMT400025887 Potato cytosol, peroxisome, plasma membrane 57.77 41.65
VIT_18s0122g00780.t01 Wine grape cytosol, peroxisome, plasma membrane 58.86 40.91
CDY32951 Canola mitochondrion 15.53 38.26
CDX96883 Canola cytosol, peroxisome, plasma membrane 25.89 38.15
GSMUA_Achr3P03730_001 Banana cytosol, golgi, plasma membrane 49.32 37.47
CDY43616 Canola plasma membrane 42.23 37.44
CDY50481 Canola plasma membrane 21.25 35.94
CDY14875 Canola mitochondrion 16.08 35.76
CDY32943 Canola plasma membrane 42.23 35.31
CDX96881 Canola mitochondrion 15.8 35.15
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 42.23 34.91
CDY43610 Canola mitochondrion 15.26 34.78
Os06t0325200-01 Rice cytosol 51.23 34.06
CDY14879 Canola endoplasmic reticulum, golgi 11.72 32.82
CDY14881 Canola plasma membrane 42.23 32.77
CDX96886 Canola plasma membrane 42.23 32.77
CDX96885 Canola plasma membrane 42.23 32.77
EER88333 Sorghum cytosol, mitochondrion, plasma membrane, plastid 50.41 32.29
TraesCS7A01G226600.1 Wheat plasma membrane 49.59 32.27
TraesCS7B01G193000.2 Wheat plasma membrane 49.59 32.27
TraesCS7D01G227800.1 Wheat plasma membrane 49.59 32.27
Os06t0324800-01 Rice mitochondrion, plasma membrane 50.95 32.13
CDY32949 Canola plasma membrane 39.24 32.0
CDY60903 Canola plasma membrane 42.51 31.97
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 42.51 31.9
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 42.23 31.7
CDY07686 Canola plasma membrane 44.69 31.42
CDY43612 Canola peroxisome, plasma membrane, vacuole 42.51 31.39
HORVU0Hr1G020720.1 Barley peroxisome, plasma membrane, plastid 47.96 31.15
CDX78256 Canola plasma membrane 44.96 31.07
CDX73457 Canola plasma membrane 44.96 31.07
CDY13225 Canola plasma membrane 43.6 31.07
CDY22354 Canola golgi, plasma membrane, vacuole 38.96 30.82
CDX91502 Canola plasma membrane 42.51 30.77
CDX88275 Canola extracellular, plasma membrane, vacuole 21.8 30.77
CDY62546 Canola plasma membrane 43.6 30.71
CDY52378 Canola extracellular, plasma membrane 38.15 30.63
CDX74874 Canola plasma membrane 44.41 30.58
CDX91503 Canola plasma membrane 44.41 30.58
CDY22352 Canola plasma membrane 44.41 30.47
CDX74877 Canola plasma membrane 42.51 30.29
CDX76138 Canola plasma membrane 44.14 30.17
CDY14883 Canola plasma membrane, vacuole 43.87 30.09
CDY18359 Canola plasma membrane 41.96 29.9
CDX93291 Canola plasma membrane 41.69 29.71
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 44.14 29.67
CDX74875 Canola plasma membrane 42.51 28.57
CDY60902 Canola plasma membrane 44.69 28.23
CDX96889 Canola plasma membrane, vacuole 38.42 28.03
CDX95146 Canola endoplasmic reticulum, plasma membrane 33.52 27.7
CDY31502 Canola plasma membrane 19.07 26.62
CDY47815 Canola plasma membrane 23.98 26.27
GSMUA_Achr4P09810_001 Banana peroxisome, plasma membrane, plastid 26.98 24.03
CDY14878 Canola cytosol 5.99 23.91
CDX84703 Canola plasma membrane 16.08 20.85
CDY32067 Canola golgi, plasma membrane, vacuole 5.99 19.64
CDX96884 Canola cytosol, plasma membrane, vacuole 7.08 15.66
CDY32942 Canola plasma membrane 8.45 12.81
CDX88277 Canola cytosol, extracellular 3.0 10.38
CDY14876 Canola plasma membrane 5.45 10.36
CDX96882 Canola plasma membrane 5.45 10.36
CDY32947 Canola extracellular, golgi, plastid 1.36 4.17
CDY40417 Canola endoplasmic reticulum, extracellular 0.27 2.08
CDY32950 Canola cytosol 0.54 2.06
CDY43613 Canola cytosol, extracellular, golgi 0.0 0.0
CDY14880 Canola extracellular 0.0 0.0
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078DG75EnsemblPlants:CDX88276ProteinID:CDX88276ProteinID:CDX88276.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00147772001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF210
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDEEF1SEG:seg::
Description
BnaC06g37200D
Coordinates
chrLK031855:-:129586..131453
Molecular Weight (calculated)
40991.5 Da
IEP (calculated)
7.877
GRAVY (calculated)
0.135
Length
367 amino acids
Sequence
(BLAST)
001: MSEFANKKTR GSFISAVFSM QGLGILMSSA VTMAVCAAFK NAGEGSSEKI RAEESDIAWR LILMIGAIPA ALTFYWRMRM PETARYTALV EKNAFQAEKD
101: MQKVMSIYKV SQVAEDSSSE TPHPPPSTSS HSSYKLFSRR FFILHGRDLF AASANWFLVD VVFYTSNLLL SQIVNLSDKP ANMTNVAAIV AACSTIPGYW
201: FTVYFIDRIG RVKIQMMGFF FMAAVYLAAG IPYSWFRSEN NKTNDQGFMI LYGFIFFFSN FGPNTTTFII PAELFPARFR STCHGISGAA GKLGAIAGTV
301: GFLWGTKRDE EHKDVFPDVK RVRIAFFILG GVCIAGMLVT YFFTRETMGR SLEENEEEDI DDKDVVC
Best Arabidopsis Sequence Match ( AT1G20860.1 )
(BLAST)
001: MPIKVLSSLD VARTQWYHFK AIIVAGMGLF TDAYDLFCIA PVMKMISHVY YNGDSINTAV LSTSYAIALL GTATGQLVFG YLGDRVGRRR VYGLCLIIMI
101: LSSFGCGFSV CTTRRSCVMV SLGFFRFFLG LGIGGDYPLS ATIMSEFANK RTRGAFIAAV FSMQGLGILV SSAVTMAVCV AFKRSGGGLE VDAAAPTEAD
201: LAWRLILMIG ALPAALTFYW RMLMPETARY TALVENNIVQ AAKDMQRVMS RSHISDEATT DPPPPPPPPS YKLFSRCFFR LHGRDLFAAS FNWFLVDIVF
301: YTSNLLLSHI FSHYSKKPST AENVYDAAFE VAELGAIIAA CSTIPGYWFT VYFIDKIGRV KIQIMGFFFM AVIYLVAGIP YSWYWSKHEH NNKGFMVLYG
401: LVFFFCNFGP NTTTFIIPAE HFPARFRSTC HGISGAAGKL GAIVGTVGFL WATKKMESDD KNQIYPEVNR MRIAFLILGG VCIAGILVTY FFTKETMGRS
501: LEENEHDQDN NAESEDEPQI VDGQSSVSTL LQTR
Arabidopsis Description
PHT1;8phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.