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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74877 Canola plasma membrane 93.77 99.42
Bra005071.1-P Field mustard plasma membrane 92.12 99.21
CDX91502 Canola plasma membrane 91.94 99.01
CDY18359 Canola plasma membrane 90.29 95.73
CDX93291 Canola plasma membrane 90.11 95.53
CDY32067 Canola golgi, plasma membrane, vacuole 19.05 92.86
AT2G38940.1 Thale cress plasma membrane 89.01 91.01
CDX74874 Canola plasma membrane 86.26 88.37
CDX91503 Canola plasma membrane 85.53 87.62
CDY62546 Canola plasma membrane 83.52 87.52
CDY07686 Canola plasma membrane 82.78 86.59
CDY13225 Canola plasma membrane 80.77 85.63
CDX76138 Canola plasma membrane 82.78 84.17
CDX73457 Canola plasma membrane 80.95 83.24
CDX78256 Canola plasma membrane 80.77 83.05
CDY40416 Canola plasma membrane 39.74 82.51
CDY14880 Canola extracellular 12.64 82.14
CDY14877 Canola vacuole 17.03 81.58
CDY40417 Canola endoplasmic reticulum, extracellular 7.14 81.25
VIT_07s0005g03290.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 77.84 80.95
CDY32949 Canola plasma membrane 65.57 79.56
CDY32948 Canola mitochondrion 33.52 79.22
VIT_07s0005g03300.t01 Wine grape golgi, plasma membrane, vacuole 33.52 79.22
CDX96884 Canola cytosol, plasma membrane, vacuole 23.99 78.92
KRH32181 Soybean extracellular 75.09 78.69
CDY43613 Canola cytosol, extracellular, golgi 20.51 77.78
CDY43612 Canola peroxisome, plasma membrane, vacuole 70.51 77.46
CDY50480 Canola endoplasmic reticulum, golgi, plasma membrane 69.05 77.1
CDY60903 Canola plasma membrane 68.86 77.05
KRG95659 Soybean plasma membrane 76.01 76.99
KRH67373 Soybean plasma membrane 76.01 76.99
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 68.86 76.89
CDY32947 Canola extracellular, golgi, plastid 16.85 76.67
CDX96885 Canola plasma membrane 66.12 76.32
CDX96886 Canola plasma membrane 66.12 76.32
CDY14881 Canola plasma membrane 66.12 76.32
Solyc09g066410.1.1 Tomato endoplasmic reticulum 73.81 76.18
CDY22354 Canola golgi, plasma membrane, vacuole 64.1 75.43
CDX84703 Canola plasma membrane 39.01 75.27
CDY52378 Canola extracellular, plasma membrane 62.82 75.05
CDY22352 Canola plasma membrane 73.44 74.95
CDY32943 Canola plasma membrane 60.26 74.94
Solyc06g034200.1.1 Tomato plasma membrane 73.26 74.91
CDX95146 Canola endoplasmic reticulum, plasma membrane 60.81 74.77
CDY14879 Canola endoplasmic reticulum, golgi 17.77 74.05
CDY47815 Canola plasma membrane 45.24 73.73
CDY14883 Canola plasma membrane, vacuole 71.43 72.9
CDY71773 Canola plasma membrane 43.96 72.73
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 72.34 72.34
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 58.42 71.85
CDX96889 Canola plasma membrane, vacuole 65.75 71.37
CDY32942 Canola plasma membrane 31.32 70.66
CDY43616 Canola plasma membrane 53.48 70.53
CDY60902 Canola plasma membrane 73.99 69.54
CDX96883 Canola cytosol, peroxisome, plasma membrane 31.32 68.67
CDX96882 Canola plasma membrane 24.18 68.39
CDY14876 Canola plasma membrane 24.18 68.39
CDY50481 Canola plasma membrane 27.11 68.2
CDY32950 Canola cytosol 11.72 65.98
CDY32951 Canola mitochondrion 17.95 65.77
CDY43610 Canola mitochondrion 18.13 61.49
GSMUA_Achr4P26760_001 Banana extracellular 15.93 60.84
CDX96881 Canola mitochondrion 17.95 59.39
CDY14875 Canola mitochondrion 17.77 58.79
CDY14878 Canola cytosol 9.89 58.7
Solyc09g073010.1.1 Tomato golgi, peroxisome, plasma membrane 42.12 58.52
CDY50482 Canola extracellular, mitochondrion 5.86 56.14
CDX88277 Canola cytosol, extracellular 9.52 49.06
CDX88279 Canola plasma membrane 41.21 48.91
CDX88275 Canola extracellular, plasma membrane, vacuole 23.26 48.85
CDX87598 Canola plasma membrane 42.86 45.79
CDX87599 Canola plasma membrane 44.69 45.19
CDX88274 Canola plasma membrane 44.32 44.98
CDX68097 Canola plasma membrane 43.96 44.94
CDY31502 Canola plasma membrane 21.61 44.87
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 43.41 43.97
CDX85949 Canola plasma membrane 43.77 43.38
CDX88276 Canola golgi, plasma membrane 28.57 42.51
CDY31503 Canola plasma membrane, plastid 33.52 42.26
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 39.19 41.88
CDY29499 Canola plasma membrane, plastid 33.33 41.84
CDX87600 Canola plasma membrane 44.51 41.75
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 38.64 41.7
CDY72521 Canola plastid 19.23 37.37
CDY31501 Canola plasma membrane 19.6 37.28
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078CDC4EnsemblPlants:CDX74875ProteinID:CDX74875ProteinID:CDX74875.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005315GO:GO:0005575GO:GO:0006810
GO:GO:0006817GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00116867001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083
PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF341InterPro:Phos_permeaseSUPFAM:SSF103473TIGRFAMs:TIGR00887
TMHMM:TMhelixUniParc:UPI0004EE514ASEG:seg:::
Description
BnaA05g06210D
Coordinates
chrLK031802:-:1156080..1157777
Molecular Weight (calculated)
59720.3 Da
IEP (calculated)
8.846
GRAVY (calculated)
0.438
Length
546 amino acids
Sequence
(BLAST)
001: MAGDQLKVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVPGSA KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSVASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPAPAYA
201: EDALRSTVPQ ADLVWRIILM VGAIPAAMTY YSRSKMPETA RYTALVAKDA KLAASDMSRV LQVEIEAEQE KVEEISSNKS KAFSLFSKEF MKRHGLHLLG
301: TTSTCAIGWI PPAQTMNAIQ EVFKIARAQT LIALCSTVPG YWFTVAFIDV IGRFAIQMMG FFFMTVFMFA LAIPYNHWTH KENRIGFVIM YSLTFFFANF
401: GPNATTFVVP AEIFPARFRS TCHGISAASG KLGAMVGAFG FLYLAQSPDK NKTDAGYPPG IGVRNSLLVL GVVNFLGILF TFLVPESKGK SLEEMSGENE
501: DNENTKSDSR TVPIVYFVIR SPLFLFFSCL LVSSNLICSS FDILMF
Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.