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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, golgi
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14880 Canola extracellular 17.18 100.0
CDX96885 Canola plasma membrane 96.32 99.58
CDY14881 Canola plasma membrane 96.32 99.58
CDX96886 Canola plasma membrane 96.32 99.58
Bra027492.1-P Field mustard golgi, plasma membrane, vacuole 38.24 99.47
CDY22353 Canola endoplasmic reticulum, golgi, plasma membrane 99.39 99.39
CDY60903 Canola plasma membrane 99.18 99.39
CDY14877 Canola vacuole 23.11 99.12
CDY32948 Canola mitochondrion 46.63 98.7
CDY14879 Canola endoplasmic reticulum, golgi 26.38 98.47
CDY32943 Canola plasma membrane 87.53 97.49
CDY32949 Canola plasma membrane 88.96 96.67
CDX96884 Canola cytosol, plasma membrane, vacuole 32.52 95.78
CDY43612 Canola peroxisome, plasma membrane, vacuole 97.34 95.77
CDY43613 Canola cytosol, extracellular, golgi 28.02 95.14
CDY71773 Canola plasma membrane 63.6 94.24
CDY32944 Canola endoplasmic reticulum, golgi, plasma membrane 84.66 93.24
CDY43616 Canola plasma membrane 78.73 93.0
CDY22354 Canola golgi, plasma membrane, vacuole 87.53 92.24
CDY52378 Canola extracellular, plasma membrane 85.48 91.47
CDY32947 Canola extracellular, golgi, plastid 22.29 90.83
CDY32942 Canola plasma membrane 44.79 90.5
AT5G43360.1 Thale cress plasma membrane 93.66 87.91
CDX95146 Canola endoplasmic reticulum, plasma membrane 78.53 86.49
AT5G43370.1 Thale cress endoplasmic reticulum, plasma membrane 91.62 85.5
AT5G43350.1 Thale cress endoplasmic reticulum, plasma membrane 91.41 85.31
CDY47815 Canola plasma membrane 58.08 84.78
CDX96883 Canola cytosol, peroxisome, plasma membrane 42.54 83.53
CDY50481 Canola plasma membrane 36.4 82.03
CDY22352 Canola plasma membrane 86.91 79.44
CDY14883 Canola plasma membrane, vacuole 83.03 75.89
CDX93291 Canola plasma membrane 78.73 74.76
CDY18359 Canola plasma membrane 78.53 74.56
CDX96889 Canola plasma membrane, vacuole 76.48 74.35
CDX91502 Canola plasma membrane 76.69 73.96
KRH31705 Soybean mitochondrion 80.16 73.55
CDX74877 Canola plasma membrane 77.3 73.4
CDY32067 Canola golgi, plasma membrane, vacuole 16.77 73.21
PGSC0003DMT400034874 Potato plasma membrane 78.12 72.76
PGSC0003DMT400034988 Potato plasma membrane 78.12 72.76
KRG92314 Soybean cytosol, golgi, plasma membrane 79.75 72.76
CDY60902 Canola plasma membrane 86.3 72.63
CDY13225 Canola plasma membrane 76.48 72.62
KRH69124 Soybean plasma membrane 79.14 72.61
VIT_05s0049g00920.t01 Wine grape plasma membrane 79.75 72.49
Solyc03g005530.1.1 Tomato plasma membrane 77.91 72.16
Solyc03g005560.1.1 Tomato plasma membrane 77.91 72.16
CDX84703 Canola plasma membrane 41.72 72.08
KRH34477 Soybean extracellular 78.94 72.01
CDY50482 Canola extracellular, mitochondrion 8.38 71.93
CDX74874 Canola plasma membrane 77.91 71.48
CDY62546 Canola plasma membrane 76.07 71.4
CDX91503 Canola plasma membrane 77.51 71.11
CDY07686 Canola plasma membrane 75.87 71.07
CDX78256 Canola plasma membrane 77.1 71.0
CDX73457 Canola plasma membrane 77.1 71.0
CDX76138 Canola plasma membrane 77.71 70.76
CDX74875 Canola plasma membrane 77.1 69.05
CDY14876 Canola plasma membrane 27.2 68.91
CDX96882 Canola plasma membrane 27.2 68.91
CDX79505 Canola cytosol, endoplasmic reticulum, plasma membrane 76.28 68.31
CDY40417 Canola endoplasmic reticulum, extracellular 6.54 66.67
VIT_05s0049g00930.t01 Wine grape plasma membrane 79.75 64.78
CDY40416 Canola plasma membrane 34.56 64.26
CDY32951 Canola mitochondrion 19.22 63.09
Os01t0741300-00 Rice mitochondrion 13.91 61.26
Os04t0508751-00 Rice mitochondrion 13.7 60.36
CDY43610 Canola mitochondrion 19.63 59.63
CDY32950 Canola cytosol 11.66 58.76
CDX96881 Canola mitochondrion 19.63 58.18
CDY14875 Canola mitochondrion 19.43 57.58
CDY14878 Canola cytosol 10.43 55.43
CDX88275 Canola extracellular, plasma membrane, vacuole 26.18 49.23
CDX88279 Canola plasma membrane 46.01 48.91
CDY31502 Canola plasma membrane 25.77 47.91
CDX88277 Canola cytosol, extracellular 10.22 47.17
CDX87598 Canola plasma membrane 47.65 45.6
CDX68097 Canola plasma membrane 49.49 45.32
CDX87599 Canola plasma membrane 49.69 45.0
CDY31503 Canola plasma membrane, plastid 39.06 44.11
CDY45985 Canola endoplasmic reticulum, plasma membrane, plastid 48.47 43.97
CDY29499 Canola plasma membrane, plastid 39.06 43.91
CDX85949 Canola plasma membrane 49.28 43.74
CDX88274 Canola plasma membrane 47.44 43.12
CDX88276 Canola golgi, plasma membrane 31.7 42.23
CDX96616 Canola golgi, mitochondrion, plasma membrane, plastid 43.97 42.07
CDY33652 Canola golgi, mitochondrion, plasma membrane, plastid 43.35 41.9
CDX87600 Canola plasma membrane 48.26 40.55
CDY31501 Canola plasma membrane 21.47 36.59
CDY72521 Canola plastid 20.86 36.3
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.6MapMan:25.3.2.1GO:A0A078IHN7UniProt:A0A078IHN7EnsemblPlants:CDY50480
ProteinID:CDY50480ProteinID:CDY50480.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00096861001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PFscan:PS50850
PANTHER:PTHR24064PANTHER:PTHR24064:SF414SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE9CBF:
Description
BnaC09g17610DBnaC09g17610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHN7]
Coordinates
chrLK032915:-:66269..68014
Molecular Weight (calculated)
53535.1 Da
IEP (calculated)
9.472
GRAVY (calculated)
0.404
Length
489 amino acids
Sequence
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPLSE KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIV CSVASGLSFG NKAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPAPTYA
201: VNRALSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATQDMSKV LQVELEMEER AEDIVKDPRL NYGLFSKEFA KRHGLPLLGS
301: TMNGIHEVFM IARAQTLIAL CSTVPGYWFT VAFIDIMGRF AIQLMGFFMM TVFMFAIAFP YDHWIKPDNR IGFVVMYSLT FFFANFGPNA TTFIVPAEIF
401: PARLRSTCHG ISAATGKAGA IVGAFGFLYA AQPQDKTKTD AGYPPGIGVK NSLIMLGVIN FVGMLFTFLV PEPKGKSLEE LSGETEAEK
Best Arabidopsis Sequence Match ( AT5G43360.1 )
(BLAST)
001: MADQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RLYYFNPTSA KPGSLPPHVA AAVNGVALCG TLAGQLFFGW LGDKLGRKKV
101: YGITLIMMIL CSVASGLSLG NSAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPSPTYE
201: QDRFLSTPPQ ADYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDLELEER VEDDVKDPKK NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNAIHEV FKIARAQTLI ALCSTVPGYW FTVAFIDIIG RFAIQLMGFF MMTVFMFAIA FPYNHWILPD
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAATGKA GAIVGAFGFL YAAQPQDKTK TDAGYPPGIG VKNSLIMLGV INFVGMLFTF
501: LVPEPKGKSL EELSGEAEVD K
Arabidopsis Description
PHT1-3Probable inorganic phosphate transporter 1-3 [Source:UniProtKB/Swiss-Prot;Acc:O48639]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.