Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g090080.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 95.7 | 95.88 |
| PGSC0003DMT400044370 | Potato | endoplasmic reticulum, plasma membrane | 84.3 | 83.83 |
| VIT_05s0049g00940.t01 | Wine grape | plasma membrane | 83.74 | 83.58 |
| KRH34475 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 79.25 | 80.46 |
| KRG92315 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 79.07 | 80.27 |
| PGSC0003DMT400034874 | Potato | plasma membrane | 75.89 | 77.33 |
| PGSC0003DMT400034988 | Potato | plasma membrane | 75.89 | 77.33 |
| PGSC0003DMT400026632 | Potato | endoplasmic reticulum, golgi, plasma membrane | 70.65 | 74.56 |
| PGSC0003DMT400009710 | Potato | plasma membrane | 55.14 | 71.26 |
| PGSC0003DMT400045125 | Potato | golgi, plasma membrane | 22.43 | 69.36 |
| PGSC0003DMT400026636 | Potato | endoplasmic reticulum, golgi | 42.43 | 69.21 |
| PGSC0003DMT400034875 | Potato | cytosol, extracellular, plasma membrane | 20.93 | 68.71 |
| PGSC0003DMT400006059 | Potato | plasma membrane | 57.38 | 58.03 |
| PGSC0003DMT400006063 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 57.2 | 57.84 |
| PGSC0003DMT400009805 | Potato | cytosol | 56.26 | 55.03 |
| PGSC0003DMT400025887 | Potato | cytosol, peroxisome, plasma membrane | 49.91 | 52.46 |
| PGSC0003DMT400026633 | Potato | cytosol, golgi | 29.72 | 29.72 |
Protein Annotations
| EntrezGene:102589570 | MapMan:24.2.2.6 | MapMan:25.3.2.1 | EMBL:AJ318822 | ProteinID:CAC87043 | ProteinID:CAC87043.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006817 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| UniProt:M1BG32 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | EnsemblPlantsGene:PGSC0003DMG400017225 |
| PGSC:PGSC0003DMG400017225 | EnsemblPlants:PGSC0003DMT400044368 | PFscan:PS50850 | PANTHER:PTHR24064 | PANTHER:PTHR24064:SF414 | InterPro:Phos_permease |
| SUPFAM:SSF103473 | TIGRFAMs:TIGR00887 | TMHMM:TMhelix | UniParc:UPI00029558FE | RefSeq:XP_006354489.1 | SEG:seg |
Description
Transmembrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017225]
Coordinates
chr9:+:56385699..56387618
Molecular Weight (calculated)
58564.8 Da
IEP (calculated)
8.844
GRAVY (calculated)
0.378
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDQLQVLN ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CISLVTKLLG RIYYHHQGAP KPGILPPGIS AAVNGVAFVG TLSGQLFFGW LGDKMGRKRV
101: YGMTLMIMVI CSIASGLSFG KTPSGVIATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVALVVSGAF KNAYPAPIYS
201: VNNEGSTPQE ADIVWRIILM FGAIPALLTY YWRMKMPETA RYTALVAKNA TKAASDMSKV LNVEIEAEDD KIEKIVAIQG NNFGLFSKEF LHRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSKIGWIP HPETMNALDE VFKIAKAQTL IALCSTVPGY WFTVAFIDRM GRFAIQLMGF FFMTVFMFAL AIPYNHWTKK
401: ENRFGFVVMY SLTFFFANFG PNATTFVVPA EIFPARLRST CHGISAAAGK AGAIVGAFGF LYAAQSTDPT KVDAGYPTGI GVKNALIVLG CVNFLGMLFT
501: LLVPESKGKS LEEMSKENEG EEEITKVENA QTIPV
101: YGMTLMIMVI CSIASGLSFG KTPSGVIATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVALVVSGAF KNAYPAPIYS
201: VNNEGSTPQE ADIVWRIILM FGAIPALLTY YWRMKMPETA RYTALVAKNA TKAASDMSKV LNVEIEAEDD KIEKIVAIQG NNFGLFSKEF LHRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSKIGWIP HPETMNALDE VFKIAKAQTL IALCSTVPGY WFTVAFIDRM GRFAIQLMGF FFMTVFMFAL AIPYNHWTKK
401: ENRFGFVVMY SLTFFFANFG PNATTFVVPA EIFPARLRST CHGISAAAGK AGAIVGAFGF LYAAQSTDPT KVDAGYPTGI GVKNALIVLG CVNFLGMLFT
501: LLVPESKGKS LEEMSKENEG EEEITKVENA QTIPV
001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV
Arabidopsis Description
PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.