Factsheet for PGSC0003DMT400034875

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	extracellular
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045125	Potato	golgi, plasma membrane	33.74	31.79
KRH19554	Soybean	golgi, plasma membrane, vacuole	31.29	29.48
PGSC0003DMT400026636	Potato	endoplasmic reticulum, golgi	50.31	25.0
PGSC0003DMT400009710	Potato	plasma membrane	58.9	23.19
PGSC0003DMT400026632	Potato	endoplasmic reticulum, golgi, plasma membrane	69.33	22.29
PGSC0003DMT400044368	Potato	endoplasmic reticulum, plasma membrane	68.71	20.93
PGSC0003DMT400044370	Potato	endoplasmic reticulum, plasma membrane	68.1	20.63
PGSC0003DMT400034874	Potato	plasma membrane	65.03	20.19
PGSC0003DMT400034988	Potato	plasma membrane	65.03	20.19
PGSC0003DMT400009805	Potato	cytosol	63.19	18.83
PGSC0003DMT400006063	Potato	cytosol, endoplasmic reticulum, plasma membrane	54.6	16.82
PGSC0003DMT400006059	Potato	plasma membrane	53.99	16.64
GSMUA_Achr2P04130_001	Banana	plasma membrane	53.37	16.48
PGSC0003DMT400025887	Potato	cytosol, peroxisome, plasma membrane	49.69	15.91
PGSC0003DMT400026633	Potato	cytosol, golgi	50.31	15.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400034875	EnsemblPlantsGene:PGSC0003DMG400013404	Gene3D:1.20.1250.20	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:MFS_trans_sf	PANTHER:PTHR24064	PANTHER:PTHR24064:SF331	PGSC:PGSC0003DMG400013404	SEG:seg	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0002965CB0	UniProt:M1B1F5	MapMan:24.2.2.6	MapMan:25.3.2.1	:

Description

PT1 [Source:PGSC_GENE;Acc:PGSC0003DMG400013404]

Coordinates

chr3:+:630896..631709

Molecular Weight (calculated)

17525.2 Da

IEP (calculated)

8.424

GRAVY (calculated)

0.326

Length

163 amino acids

Sequence
(BLAST)

001: MGFFTDAYDL FCISLVTKLL GRIYYHRDGS PKPGIGGDYP LSATIMSEYT NKKTRGAFIA AVFAMQGFGI LVGGILVAIV VSVLFNAGYP SPAFQHNAVA
101: STVPEADHAW RVILILGVLP ALLTYYWRHP NKTDSSSPPG IGVRNSLIVL ESDEITTAIS KGS

Best Arabidopsis Sequence Match ( AT3G54700.1 )
(BLAST)

001: MAGDQLNVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVDGSE KPGTLPPNVS AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG SNPKTVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILTGG IFAIIVSAAF EAKFPAPTYQ
201: IDALASTVPQ ADYVWRIILM VGALPAAMTY YSRSKMPETA RYTALVAKDA KLAASNMSKV LQVEIEAEQQ GTEDKSNSFG LFSKEFMKRH GLHLLGTTST
301: WFLLDIAFYS QNLFQKDIFS AIGWIPPAQT MNAIQEVFKI ARAQTLIALC STVPGYWFTV AFIDVIGRFA IQMMGFFFMT VFMFALAIPY DHWTHKENRI
401: GFVAMYSLTF FFANFGPNAT TFVVPAEIFP ARFRSTCHGI SAASGKLGAM VGAFGFLYLA QSPDKTKTEH GYPPGIGVKN SLIVLGVVNL LGMVFTLLVP
501: ESKGKSLEEM SGENEQNDES SSSSNNNSNN AVSTA

Arabidopsis Description

PHT1-7Probable inorganic phosphate transporter 1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q494P0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.