Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40982 | Canola | cytosol, nucleus, vacuole | 100.0 | 100.0 |
| AT3G25930.1 | Thale cress | cytosol | 76.67 | 74.68 |
Protein Annotations
| EnsemblPlants:Bra036356.1 | EnsemblPlants:Bra036356.1-P | EnsemblPlantsGene:Bra036356 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF55 | PFAM:PF00582 |
| SUPFAM:SSF52402 | UniParc:UPI0002545B8E | UniProt:M4F5K0 | MapMan:35.2 | : | : |
Description
AT3G25930 (E=5e-060) | universal stress protein (USP) family protein
Coordinates
chrA02:+:22852371..22853996
Molecular Weight (calculated)
16584.3 Da
IEP (calculated)
8.854
GRAVY (calculated)
0.058
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVMVIIDE SNSSYDLLVW VLTNLKDVID SSTVVIFAKQ PQNSFTPPTA LSSSVGFAQI FYPFSANAEL MRLAQEKNTK IALGILEKAK KLCGNHGVKA
101: ETFTDVGDVK DIIHKTIQER KINLIAISDQ QNLTLKKCLP TTECSLVVVK
101: ETFTDVGDVK DIIHKTIQER KINLIAISDQ QNLTLKKCLP TTECSLVVVK
001: MKNVMLIIDE SNASYDLLIW ALENQKDTIE SSKVYIFAKQ PQNSFTPPTV LSSSVGFAQI FYPFSPNSEL IRLAQEKNMK IALGILEKAK KICLNHGIKA
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LU98]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.