Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99737 | Canola | cytosol | 75.32 | 77.33 |
| Bra036356.1-P | Field mustard | cytosol, nucleus, vacuole | 74.68 | 76.67 |
| CDY40982 | Canola | cytosol, nucleus, vacuole | 74.68 | 76.67 |
| CDY13601 | Canola | nucleus | 72.08 | 74.0 |
| CDX83574 | Canola | nucleus | 70.78 | 70.32 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:822190 | ProteinID:AEE77092.1 | EMBL:AK227799 | ArrayExpress:AT3G25930 |
| EnsemblPlantsGene:AT3G25930 | RefSeq:AT3G25930 | TAIR:AT3G25930 | RefSeq:AT3G25930-TAIR-G | EnsemblPlants:AT3G25930.1 | TAIR:AT3G25930.1 |
| ProteinID:BAB01056.1 | EMBL:BT004793 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0016787 | InterPro:IPR014729 | RefSeq:NP_566785.1 | PFAM:PF00582 | PO:PO:0000230 |
| PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020100 |
| PO:PO:0025022 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF55 | UniProt:Q9LU98 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 |
| UniParc:UPI000000C48F | InterPro:UspA | : | : | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LU98]
Coordinates
chr3:-:9492765..9494302
Molecular Weight (calculated)
17491.3 Da
IEP (calculated)
9.182
GRAVY (calculated)
-0.305
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVMLIIDE SNASYDLLIW ALENQKDTIE SSKVYIFAKQ PQNSFTPPTV LSSSVGFAQI FYPFSPNSEL IRLAQEKNMK IALGILEKAK KICLNHGIKA
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.