Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83574 | Canola | nucleus | 96.67 | 93.55 |
| CDX99737 | Canola | cytosol | 73.33 | 73.33 |
| AT3G25930.1 | Thale cress | cytosol | 74.0 | 72.08 |
| CDY40982 | Canola | cytosol, nucleus, vacuole | 71.33 | 71.33 |
Protein Annotations
| EnsemblPlants:CDY13601 | EnsemblPlantsGene:GSBRNA2T00078012001 | Gene3D:3.40.50.620 | GO:A0A078FKE2 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF55 | PFAM:PF00582 |
| ProteinID:CDY13601 | ProteinID:CDY13601.1 | SEG:seg | SUPFAM:SSF52402 | UniParc:UPI0004EDF88B | UniProt:A0A078FKE2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA06g33220DBnaA06g33220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKE2]
Coordinates
chrLK032037:-:198529..199455
Molecular Weight (calculated)
16712.3 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.124
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVMVVIDE SNSSYDVLVW VLQNLKDISD SNKLLIFAKQ PQSSVTPISL SSSVAFAQLF YPFSPSGELI RLAQQRNMKI ALGILEKAKK ICGNHGIKAD
101: TFTDVGDPNE PIHKIIQERK VNLLVTSDQQ NQSLKKCLHN TDCSLLVVEK
101: TFTDVGDPNE PIHKIIQERK VNLLVTSDQQ NQSLKKCLHN TDCSLLVVEK
001: MKNVMLIIDE SNASYDLLIW ALENQKDTIE SSKVYIFAKQ PQNSFTPPTV LSSSVGFAQI FYPFSPNSEL IRLAQEKNMK IALGILEKAK KICLNHGIKA
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
101: ETFTDDGDPK DLIRKIIQER NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LU98]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.