CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31754	Canola	endoplasmic reticulum, golgi	98.55	98.55
Bra040762.1-P	Field mustard	endoplasmic reticulum, golgi	98.34	98.34
CDY58211	Canola	endoplasmic reticulum	39.21	94.97
CDY39532	Canola	endoplasmic reticulum	90.25	89.88
AT2G29090.1	Thale cress	endoplasmic reticulum, golgi	86.31	86.31
VIT_06s0004g05050.t01	Wine grape	cytosol	64.32	71.76
KRH40883	Soybean	extracellular, golgi	63.9	64.3
CDY63039	Canola	cytosol	18.05	61.7
CDY01590	Canola	endoplasmic reticulum	56.02	57.82
CDX98611	Canola	endoplasmic reticulum, extracellular	55.6	57.39
CDY13061	Canola	endoplasmic reticulum, golgi	54.15	56.01
CDY38984	Canola	endoplasmic reticulum, extracellular	54.56	55.96
CDY23132	Canola	endoplasmic reticulum, golgi	53.94	55.79
CDY67937	Canola	endoplasmic reticulum, extracellular	53.73	55.58
CDX87793	Canola	extracellular, golgi	53.94	55.32
CDY39421	Canola	endoplasmic reticulum, extracellular	53.53	54.89
CDX99387	Canola	plastid	55.6	53.92
CDY68433	Canola	plastid	54.98	53.32
CDX82303	Canola	extracellular, golgi	52.07	52.84
CDX92318	Canola	golgi	51.66	52.64
CDX99244	Canola	golgi	48.96	47.87
CDX83755	Canola	cytosol	13.28	35.96
CDY48265	Canola	endoplasmic reticulum, golgi	30.29	29.86
CDY12205	Canola	endoplasmic reticulum, golgi	30.29	29.8
CDY46834	Canola	extracellular, golgi	30.08	29.59
CDY49505	Canola	extracellular, golgi	29.88	29.39
CDX96655	Canola	endoplasmic reticulum, golgi	29.67	29.24
CDX83746	Canola	endoplasmic reticulum, plasma membrane	28.42	28.02
CDY50827	Canola	extracellular, golgi	28.63	27.01
CDY67982	Canola	endoplasmic reticulum, golgi	18.46	25.0
CDY68146	Canola	endoplasmic reticulum	28.42	18.84

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.1.3.2	GO:A0A078CJ65	EnsemblPlants:CDX77231	ProteinID:CDX77231	ProteinID:CDX77231.1
ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00127902001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF86	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI0004EE2FEA	SEG:seg	:	:	:	:

Description

BnaC04g40260D

Coordinates

chrLK031809:-:2319563..2324549

Molecular Weight (calculated)

55068.2 Da

IEP (calculated)

10.072

GRAVY (calculated)

-0.211

Length

482 amino acids

Sequence
(BLAST)

001: MQITPFSVFF SSVYDDESAL MITISSAVVA LLVVLLQWRL HRKKQRWKLP PGSMGWPYIG ETLRLYTENP NSFFATRQNK YGEIFKTHIL GCPCVMISSP
101: EAARMVLISK AHMFKPTYPA SKERIIGPEA LFFHQGPYHS TLKRLVQSSF MPSALRPTVS HIELLVLKIL ASWTSQKSIN TLQHMKRYAF DVAIMSAFGD
201: KEEPTEIEAI KLLYQRLEMG YNSMPLNLPG TLFRKSMKAR RELSDELRRL IEKRRESRRE GGGLLGVLLG AKDQKRNGLS DSQIADNIIG VIFAATDTTA
301: SVLTWLLKYL HDHPNVLQEV SREQVCIREK IREENRGISW EDTRKMPLTT RVIQETLRAA SVLSFTFREA VQDVEFEGYL IPKGWKVLPL FRRIHHSSNF
401: FPEPEKFEPS RFEVAPKPYT FMPFGSGSHS CPGSELAKLE MLVLLHHLTT SFRWKVVGGE EGIQYGPFPV PKKGLPIRVT PI

Best Arabidopsis Sequence Match ( AT2G29090.2 )
(BLAST)

001: MQISSSSSSN FFSSLYADEP ALITLTIVVV VVVLLFKWWL HWKEQRLRLP PGSMGLPYIG ETLRLYTENP NSFFATRQNK YGDIFKTHIL GCPCVMISSP
101: EAARMVLVSK AHLFKPTYPP SKERMIGPEA LFFHQGPYHS TLKRLVQSSF MPSALRPTVS HIELLVLQTL SSWTSQKSIN TLEYMKRYAF DVAIMSAFGD
201: KEEPTTIDVI KLLYQRLERG YNSMPLDLPG TLFHKSMKAR IELSEELRKV IEKRRENGRE EGGLLGVLLG AKDQKRNGLS DSQIADNIIG VIFAATDTTA
301: SVLTWLLKYL HDHPNLLQEV SREQFSIRQK IKKENRRISW EDTRKMPLTT RVIQETLRAA SVLSFTFREA VQDVEYDGYL IPKGWKVLPL FRRIHHSSEF
401: FPDPEKFDPS RFEVAPKPYT YMPFGNGVHS CPGSELAKLE MLILLHHLTT SFRWEVIGDE EGIQYGPFPV PKKGLPIRVT PI

Arabidopsis Description

CYP707A2Abscisic acid 8'-hydroxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:O81077]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.