Factsheet for VIT_06s0004g05050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40883	Soybean	extracellular, golgi	73.15	65.97
Bra040762.1-P	Field mustard	endoplasmic reticulum, golgi	72.22	64.73
CDX77231	Canola	endoplasmic reticulum, golgi	71.76	64.32
CDY31754	Canola	endoplasmic reticulum, golgi	71.76	64.32
CDY39532	Canola	endoplasmic reticulum	70.6	63.02
AT2G29090.1	Thale cress	endoplasmic reticulum, golgi	69.21	62.03
VIT_03s0063g00380.t01	Wine grape	cytosol	59.03	58.62
VIT_02s0087g00710.t01	Wine grape	endoplasmic reticulum, plasma membrane	61.57	56.6
VIT_18s0001g10500.t01	Wine grape	extracellular, golgi	58.8	54.04
CDY58211	Canola	endoplasmic reticulum	22.69	49.25
VIT_07s0031g00690.t01	Wine grape	cytosol	55.09	48.18
VIT_18s0041g01530.t01	Wine grape	cytosol	11.57	38.17
VIT_18s0041g01510.t01	Wine grape	cytosol	14.35	38.04
VIT_06s0004g00270.t01	Wine grape	cytosol	10.88	37.01
VIT_18s0076g00340.t01	Wine grape	mitochondrion	29.4	31.13
VIT_15s0021g00310.t01	Wine grape	endoplasmic reticulum	34.49	30.53
VIT_18s0041g01580.t01	Wine grape	cytosol	30.79	29.89
VIT_15s0021g00270.t01	Wine grape	endoplasmic reticulum, golgi	33.8	29.67
VIT_11s0065g00040.t01	Wine grape	endoplasmic reticulum, extracellular	31.94	28.75
VIT_11s0065g00130.t01	Wine grape	extracellular, golgi	31.71	28.54
VIT_11s0065g00630.t01	Wine grape	golgi	30.56	28.27
VIT_18s0072g00580.t01	Wine grape	extracellular, golgi	31.02	27.92
VIT_18s0041g01810.t01	Wine grape	endoplasmic reticulum, golgi	27.31	27.63
VIT_18s0041g01800.t01	Wine grape	extracellular, plasma membrane	30.79	27.54
VIT_00s0704g00030.t01	Wine grape	endoplasmic reticulum, golgi	30.56	27.5
VIT_15s0024g01830.t01	Wine grape	endoplasmic reticulum, extracellular	30.56	27.33
VIT_18s0001g12870.t01	Wine grape	endoplasmic reticulum, golgi	31.71	27.29
VIT_19s0090g00140.t01	Wine grape	endoplasmic reticulum, golgi	29.63	27.0
VIT_04s0008g02960.t01	Wine grape	extracellular, golgi	30.09	26.97
VIT_00s0704g00020.t01	Wine grape	extracellular, golgi	29.86	26.88
VIT_13s0067g02850.t01	Wine grape	endoplasmic reticulum, vacuole	29.86	26.01
VIT_04s0023g02350.t01	Wine grape	mitochondrion	27.31	25.54
VIT_19s0090g00190.t01	Wine grape	endoplasmic reticulum, golgi, plastid	21.76	25.2
VIT_10s0092g00070.t01	Wine grape	extracellular, golgi	27.08	24.63
VIT_18s0041g01590.t01	Wine grape	extracellular	27.31	24.43
VIT_18s0041g01500.t01	Wine grape	extracellular, golgi	31.71	14.68

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100260462	wikigene:100260462	MapMan:11.1.3.2	ProteinID:CBI16102	ProteinID:CBI16102.3
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7SKC6	EMBL:FN594951
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009687	GO:GO:0009987
GO:GO:0010268	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100260462	wikigene:LOC100260462
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF86
SUPFAM:SSF48264	TIGR:TC58840	UniParc:UPI00015C7453	ArrayExpress:VIT_06s0004g05050	EnsemblPlantsGene:VIT_06s0004g05050	EnsemblPlants:VIT_06s0004g05050.t01
RefSeq:XP_002280720	RefSeq:XP_002280720.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:-:5973296..5977333

Molecular Weight (calculated)

48858.2 Da

IEP (calculated)

9.751

GRAVY (calculated)

-0.239

Length

432 amino acids

Sequence
(BLAST)

001: MGWPYIGETL KLYTENPNSF FSNRQKRHGD VFKTSILGCP CVMVSSPEAI KVVLVTRAHL FKPTYPSSKE RMIGPEAIFF HEGPYHSRLK KLVQASFLPS
101: AIRGSVSAIE QIVLKFLPTW NNGVVNTLQE MKKYTFDVAI LSAFGHKLDL EMEGIKHLYR SLEKGYNSMP INLPGTPFRR AMKARQLLNE TFRRLIAKRR
201: GSSKQGGGLL GILLGAKDQH LNHLSDSQIA DNIIGVIFAA HDTTASVLTW LLKYLHDNRD LLEAVTREQE GIKASISEAN RGLTWDDTRR MPLTGRVIQE
301: TLRTASILSF TFREAVEDVE FEGYYIPKGW KVLPLFRSIH YCADFFPQPE KFDPSRFEVP PKPNTFLPFG NGVHACPGSE LAKLEMFVLL HHLTTSYRWK
401: VVGGEDGIQY VPFPVPQRGL PIEVTPRKAN AE

Best Arabidopsis Sequence Match ( AT2G29090.2 )
(BLAST)

001: MQISSSSSSN FFSSLYADEP ALITLTIVVV VVVLLFKWWL HWKEQRLRLP PGSMGLPYIG ETLRLYTENP NSFFATRQNK YGDIFKTHIL GCPCVMISSP
101: EAARMVLVSK AHLFKPTYPP SKERMIGPEA LFFHQGPYHS TLKRLVQSSF MPSALRPTVS HIELLVLQTL SSWTSQKSIN TLEYMKRYAF DVAIMSAFGD
201: KEEPTTIDVI KLLYQRLERG YNSMPLDLPG TLFHKSMKAR IELSEELRKV IEKRRENGRE EGGLLGVLLG AKDQKRNGLS DSQIADNIIG VIFAATDTTA
301: SVLTWLLKYL HDHPNLLQEV SREQFSIRQK IKKENRRISW EDTRKMPLTT RVIQETLRAA SVLSFTFREA VQDVEYDGYL IPKGWKVLPL FRRIHHSSEF
401: FPDPEKFDPS RFEVAPKPYT YMPFGNGVHS CPGSELAKLE MLILLHHLTT SFRWEVIGDE EGIQYGPFPV PKKGLPIRVT PI

Arabidopsis Description

CYP707A2Abscisic acid 8'-hydroxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:O81077]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.