Factsheet for VIT_06s0004g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g01530.t01	Wine grape	cytosol	52.76	51.15
VIT_18s0041g01510.t01	Wine grape	cytosol	54.33	42.33
PGSC0003DMT400038256	Potato	cytosol	33.07	22.11
KRH43011	Soybean	endoplasmic reticulum, golgi	77.17	20.16
KRH43009	Soybean	endoplasmic reticulum, plasma membrane	74.8	19.75
KRH59126	Soybean	endoplasmic reticulum, plasma membrane	74.02	19.34
PGSC0003DMT400038240	Potato	golgi	65.35	17.29
VIT_04s0008g02960.t01	Wine grape	extracellular, golgi	65.35	17.22
VIT_18s0072g00580.t01	Wine grape	extracellular, golgi	64.57	17.08
VIT_11s0065g00130.t01	Wine grape	extracellular, golgi	64.57	17.08
VIT_11s0065g00630.t01	Wine grape	golgi	62.2	16.92
VIT_11s0065g00040.t01	Wine grape	endoplasmic reticulum, extracellular	63.78	16.88
VIT_18s0041g01810.t01	Wine grape	endoplasmic reticulum, golgi	56.69	16.86
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	59.84	16.03
VIT_18s0041g01580.t01	Wine grape	cytosol	54.33	15.51
VIT_10s0092g00070.t01	Wine grape	extracellular, golgi	57.48	15.37
VIT_18s0041g01800.t01	Wine grape	extracellular, plasma membrane	57.48	15.11
VIT_15s0024g01830.t01	Wine grape	endoplasmic reticulum, extracellular	56.69	14.91
VIT_18s0041g01590.t01	Wine grape	extracellular	54.33	14.29
VIT_03s0063g00380.t01	Wine grape	cytosol	41.73	12.18
VIT_19s0090g00140.t01	Wine grape	endoplasmic reticulum, golgi	43.31	11.6
VIT_18s0076g00340.t01	Wine grape	mitochondrion	37.01	11.52
VIT_06s0004g05050.t01	Wine grape	cytosol	37.01	10.88
VIT_18s0001g10500.t01	Wine grape	extracellular, golgi	40.16	10.85
VIT_00s0704g00030.t01	Wine grape	endoplasmic reticulum, golgi	40.94	10.83
VIT_00s0704g00020.t01	Wine grape	extracellular, golgi	40.94	10.83
VIT_13s0067g02850.t01	Wine grape	endoplasmic reticulum, vacuole	39.37	10.08
VIT_02s0087g00710.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.22	9.79
VIT_04s0023g02350.t01	Wine grape	mitochondrion	35.43	9.74
VIT_07s0031g00690.t01	Wine grape	cytosol	37.01	9.51
VIT_18s0001g12870.t01	Wine grape	endoplasmic reticulum, golgi	35.43	8.96
VIT_15s0021g00270.t01	Wine grape	endoplasmic reticulum, golgi	32.28	8.33
VIT_18s0041g01500.t01	Wine grape	extracellular, golgi	59.06	8.04
VIT_15s0021g00310.t01	Wine grape	endoplasmic reticulum	29.92	7.79
VIT_19s0090g00190.t01	Wine grape	endoplasmic reticulum, golgi, plastid	10.24	3.49

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CBI16554	ProteinID:CBI16554.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7SLM6	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0010268	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF153	SUPFAM:SSF48264	UniParc:UPI0001BE0DF8
ArrayExpress:VIT_06s0004g00270	EnsemblPlantsGene:VIT_06s0004g00270	EnsemblPlants:VIT_06s0004g00270.t01	:	:	:

Description

No Description!

Coordinates

chr6:-:391295..391874

Molecular Weight (calculated)

14368.2 Da

IEP (calculated)

8.486

GRAVY (calculated)

-0.319

Length

127 amino acids

Sequence
(BLAST)

001: MRLSPPASGS FREALVDFSY AGYNIPKGWK LYWGTGSTQR DPAFFRNPDN FDASRFEGAG PAPFSYVPFG GGPRMCLGQE FARLQILVFM HNIVKRFTWD
101: LLNPDEKIEH SPMLAPLEGL PIRLHPH

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.