Factsheet for PGSC0003DMT400038256

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g00270.t01	Wine grape	cytosol	22.11	33.07
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	81.05	32.49
PGSC0003DMT400067089	Potato	cytosol	44.21	31.34
PGSC0003DMT400056719	Potato	cytosol	27.89	28.04
PGSC0003DMT400093941	Potato	cytosol	50.53	27.51
PGSC0003DMT400044556	Potato	peroxisome, plastid	38.95	26.62
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	37.37	25.09
PGSC0003DMT400054457	Potato	cytosol	44.21	20.74
PGSC0003DMT400038240	Potato	golgi	51.58	20.42
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	52.11	20.37
KRH43009	Soybean	endoplasmic reticulum, plasma membrane	50.0	19.75
KRH59126	Soybean	endoplasmic reticulum, plasma membrane	50.0	19.55
PGSC0003DMT400019561	Potato	endoplasmic reticulum, extracellular	48.95	19.54
KRH43011	Soybean	endoplasmic reticulum, golgi	46.84	18.31
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	41.05	16.56
PGSC0003DMT400003162	Potato	extracellular	37.89	16.11
PGSC0003DMT400057212	Potato	golgi, plasma membrane	38.42	15.37
PGSC0003DMT400002095	Potato	cytosol	33.68	14.38
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	29.47	13.56
PGSC0003DMT400052818	Potato	cytosol	28.95	13.29
PGSC0003DMT400020589	Potato	endoplasmic reticulum	31.58	12.63
PGSC0003DMT400066337	Potato	endoplasmic reticulum	31.58	12.55
PGSC0003DMT400047537	Potato	extracellular, golgi	30.0	12.15
PGSC0003DMT400004951	Potato	extracellular, golgi	29.47	12.12
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	23.16	11.08
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	27.89	10.66
PGSC0003DMT400009297	Potato	endoplasmic reticulum	26.32	10.39
PGSC0003DMT400062367	Potato	extracellular, golgi	23.16	9.03

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	InterPro:IPR036396	UniProt:M1B6J1	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400014760	PGSC:PGSC0003DMG400014760
EnsemblPlants:PGSC0003DMT400038256	PANTHER:PTHR24286	PANTHER:PTHR24286:SF153	SUPFAM:SSF48264	UniParc:UPI00029528FE	SEG:seg

Description

Taxane 13-alpha-hydroxylase cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400014760]

Coordinates

chr1:-:17681887..17683177

Molecular Weight (calculated)

21720.2 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.153

Length

190 amino acids

Sequence
(BLAST)

001: MRVKIVCQQP SQDILSHLLS CPDENGKYMS ELLIANNILL LLFAGHDTSS VTLTLLIKTL AEHPQVYQNI LQAHIEIASS KKEGEFLNWD DIQKMKYSWN
101: VIAEVMIITP PILGAYREAI VDINYEGYHI PKGWKLYWNT GLTSLDPEIF PNPTRLEPSR FEEAGPAPYI DARLSARLNQ EIYLEITYSK

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.