Factsheet for PGSC0003DMT400093941

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g042880.1.1	Tomato	endoplasmic reticulum, extracellular	95.99	69.5
AT5G36130.1	Thale cress	cytosol	26.93	67.14
PGSC0003DMT400019561	Potato	endoplasmic reticulum, extracellular	86.82	63.66
PGSC0003DMT400067089	Potato	cytosol	47.28	61.57
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	79.08	56.79
VIT_11s0065g00040.t01	Wine grape	endoplasmic reticulum, extracellular	77.65	56.46
KRH60106	Soybean	endoplasmic reticulum, extracellular	77.94	56.43
VIT_11s0065g00130.t01	Wine grape	extracellular, golgi	76.5	55.62
KRH41388	Soybean	endoplasmic reticulum	76.22	55.19
VIT_18s0072g00580.t01	Wine grape	extracellular, golgi	75.07	54.58
PGSC0003DMT400038256	Potato	cytosol	27.51	50.53
PGSC0003DMT400056719	Potato	cytosol	24.93	46.03
AT5G36110.1	Thale cress	endoplasmic reticulum, golgi	60.46	44.23
PGSC0003DMT400054457	Potato	cytosol	50.72	43.7
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	58.45	43.31
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	34.1	42.05
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	54.73	40.3
PGSC0003DMT400044556	Potato	peroxisome, plastid	31.23	39.21
PGSC0003DMT400038240	Potato	golgi	51.86	37.71
PGSC0003DMT400003162	Potato	extracellular	44.41	34.68
AT5G36140.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	30.66	33.65
PGSC0003DMT400057212	Potato	golgi, plasma membrane	41.26	30.32
PGSC0003DMT400047537	Potato	extracellular, golgi	35.24	26.23
PGSC0003DMT400004951	Potato	extracellular, golgi	34.38	25.97
PGSC0003DMT400020589	Potato	endoplasmic reticulum	35.24	25.89
PGSC0003DMT400066337	Potato	endoplasmic reticulum	34.96	25.52
PGSC0003DMT400002095	Potato	cytosol	31.81	24.94
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	28.37	23.97
PGSC0003DMT400052818	Potato	cytosol	26.07	21.98
PGSC0003DMT400009297	Potato	endoplasmic reticulum	28.94	21.0
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	22.92	20.15
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	28.65	20.12
PGSC0003DMT400062367	Potato	extracellular, golgi	22.35	16.02

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1DT16	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400043512	PGSC:PGSC0003DMG400043512	EnsemblPlants:PGSC0003DMT400093941
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF66	SUPFAM:SSF48264
UniParc:UPI000295DCAF	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400043512]

Coordinates

chr7:+:40978192..40980660

Molecular Weight (calculated)

39755.5 Da

IEP (calculated)

9.022

GRAVY (calculated)

-0.189

Length

349 amino acids

Sequence
(BLAST)

001: MRKMLPNFLK PEALQRYIGI MDHIAQKHFQ SWENQEEVLV FPLAKRYTFW LACRLFVSVE DPNHVAKLAD PFDVLASGLI SIPINLPGTP FNRAIKASNF
101: IRKELVAIIK QRKIDLTEGK ASDSQDILSH MLLTSDENGK FMHELDIADK ILGLLIGGHD TASSACTFIV KYLAELPDIY DGVYKEQIEI AKSKGPGELL
201: NREDIKKMKY SWNVACEVLR LAPPLQGAFR EALVDFTFNG FSIPKGWKIY WSANSTHRNP EVFLDPLKFD PSRFEGNGPA PYTFVPFGGG PRMCPGKEYA
301: RLEILVFMHH LVKRFSWKKI IHDEKIIVNP MPIPANGLPI RLYPHHNKT

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.