Factsheet for PGSC0003DMT400054457

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g069600.2.1	Tomato	extracellular, vacuole	88.4	76.33
VIT_10s0092g00070.t01	Wine grape	extracellular, golgi	65.93	56.21
PGSC0003DMT400067089	Potato	cytosol	34.07	51.49
PGSC0003DMT400093941	Potato	cytosol	43.7	50.72
PGSC0003DMT400038256	Potato	cytosol	20.74	44.21
PGSC0003DMT400056719	Potato	cytosol	19.75	42.33
PGSC0003DMT400019561	Potato	endoplasmic reticulum, extracellular	46.91	39.92
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	46.42	38.68
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	26.17	37.46
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	43.46	37.37
PGSC0003DMT400044556	Potato	peroxisome, plastid	25.43	37.05
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	41.48	35.44
PGSC0003DMT400038240	Potato	golgi	41.98	35.42
KRH59197	Soybean	extracellular, golgi	41.48	35.37
PGSC0003DMT400003162	Potato	extracellular	37.53	34.0
PGSC0003DMT400057212	Potato	golgi, plasma membrane	34.07	29.05
PGSC0003DMT400004951	Potato	extracellular, golgi	28.15	24.68
PGSC0003DMT400047537	Potato	extracellular, golgi	28.15	24.31
PGSC0003DMT400066337	Potato	endoplasmic reticulum	28.64	24.27
PGSC0003DMT400052818	Potato	cytosol	24.44	23.91
PGSC0003DMT400002095	Potato	cytosol	25.93	23.6
PGSC0003DMT400020589	Potato	endoplasmic reticulum	27.16	23.16
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	22.22	21.79
PGSC0003DMT400009297	Potato	endoplasmic reticulum	24.44	20.58
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	24.69	20.12
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	18.77	19.14
PGSC0003DMT400062367	Potato	extracellular, golgi	20.49	17.04

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1BWD1	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400021136	PGSC:PGSC0003DMG400021136	EnsemblPlants:PGSC0003DMT400054457
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF88	SUPFAM:SSF48264
UniParc:UPI000294C082	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400021136]

Coordinates

chr2:-:28711736..28714333

Molecular Weight (calculated)

46611.8 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.310

Length

405 amino acids

Sequence
(BLAST)

001: MGEKTVVICG PNGHKFLFSN EEKLFTVFRT HSMQRIFRSY QSKNPSCPPP PSLSQSTRVI RQPGFLKPEA LARYLGEMDC ITKELLQSHW EGKSEIQTYH
101: FAKILTLTLA SRFFLGSTNS SSERMVKLVH YFDDITLGLH AMILNVPGMA FYRANKAAIA IRRELIDVIK EKKDEMSKGV KMQDILCHMI VVKDNNGEFM
201: GENEIADKIM GILVAGYSTV ATTITFLMKY VGERFDIYEK ILKEQKEIDA AKKEGELLEW EDMNKMKYSW NVICETMRLT PPLQGTFREV LTDFTYAGYT
301: IPKGWKVYWT TSSTNKNPLY FQDPQVFDPS RYEKCDGPIP YTYVPFGGGP RMCPGKEYAR LAILTFLHNV VMKYKWELLV PNEKIVGDMM PTPENGLPIR
401: LHQQY

Best Arabidopsis Sequence Match ( AT2G42850.1 )
(BLAST)

001: MVLEPNFVLS WVFLCIAATI SSTLFFFRKK HHRFITKKIQ KKKKLLPGEM GLPWIGETMD FYKAQKSNRV FEDFVNPRII KHGNIFKTRI MGSPTIVVNG
101: AEANRLILSN EFSLVVSSWP SSSVQLMGMN CIMAKQGEKH RVLRGIVANS LSYIGLESLI PKLCDTVKFH HETEWRGKEE ISLYRSAKVL TFTVVFECLY
201: GIKVEIGMLE VFERVLEGVF ALPVEFPCSK FARAKKARLE IETFLVGKVR EKRREMEKEG AEKPNTTLFS RLVEELIKGV ITEEEVVDNM VLLVFAAHDT
301: TSYAMSMTFK MLAQHPTCRD TLLQEHAQIK ANKGEGEYLT VEDVKKMKYS WQVVRETMRL SPPIFGSFRK AVADIDYGGY TIPKGWKILW TTYGTHYNPE
401: IFQDPMSFDP TRFDKPIQAY TYLPFGGGPR LCAGHQLAKI SILVFMHFVV TGFDWSLVYP DETISMDPLP FPSLGMPIKI SPKVS

Arabidopsis Description

CYP718CYP718 [Source:UniProtKB/TrEMBL;Acc:A0A178VUF2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.