Factsheet for PGSC0003DMT400056719

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003162	Potato	extracellular	95.77	40.49
Solyc11g056670.1.1	Tomato	extracellular	96.3	38.16
PGSC0003DMT400067089	Potato	cytosol	42.33	29.85
PGSC0003DMT400038256	Potato	cytosol	28.04	27.89
PGSC0003DMT400093941	Potato	cytosol	46.03	24.93
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	31.22	20.85
PGSC0003DMT400044556	Potato	peroxisome, plastid	30.16	20.5
PGSC0003DMT400054457	Potato	cytosol	42.33	19.75
PGSC0003DMT400019561	Potato	endoplasmic reticulum, extracellular	44.97	17.86
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	41.8	16.77
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	42.86	16.67
PGSC0003DMT400038240	Potato	golgi	42.33	16.67
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	40.21	16.03
PGSC0003DMT400004951	Potato	extracellular, golgi	33.86	13.85
PGSC0003DMT400066337	Potato	endoplasmic reticulum	34.39	13.6
PGSC0003DMT400052818	Potato	cytosol	29.1	13.29
PGSC0003DMT400020589	Potato	endoplasmic reticulum	33.33	13.26
PGSC0003DMT400047537	Potato	extracellular, golgi	32.28	13.01
PGSC0003DMT400057212	Potato	golgi, plasma membrane	31.75	12.63
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	28.57	10.87
PGSC0003DMT400009297	Potato	endoplasmic reticulum	27.51	10.81
PGSC0003DMT400002095	Potato	cytosol	25.4	10.79
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	19.58	8.96
PGSC0003DMT400062367	Potato	extracellular, golgi	22.75	8.83
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	16.4	7.81

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	InterPro:IPR036396	UniProt:M1BZU2	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400022059	PGSC:PGSC0003DMG400022059
EnsemblPlants:PGSC0003DMT400056719	PANTHER:PTHR24286	PANTHER:PTHR24286:SF53	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00029696E0

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400022059]

Coordinates

chr11:-:33615218..33616782

Molecular Weight (calculated)

22361.1 Da

IEP (calculated)

4.929

GRAVY (calculated)

-0.230

Length

189 amino acids

Sequence
(BLAST)

001: MINEQDEDGK YMTEVEIEDK VFGFIIGSYD TTATTITLTM KYLQQMPEFF NEIIQEQNEI SMQMMPRKEL CWNDIKKMRK TWSFVNEVLR NTPVVQGIFR
101: EAIEDFTYED FYIPKGWKIY LSFGATQKNG EYFSKCPGKE FARILILVFL HHLLKNFRWE PKVPSEKILY PFFLLAIPTD GYPITLSAV

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.