Factsheet for PGSC0003DMT400067089

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g01510.t01	Wine grape	cytosol	39.18	64.42
VIT_18s0041g01530.t01	Wine grape	cytosol	30.6	62.6
Solyc06g065430.2.1	Tomato	extracellular, plasma membrane	94.03	53.05
PGSC0003DMT400093941	Potato	cytosol	61.57	47.28
PGSC0003DMT400038256	Potato	cytosol	31.34	44.21
PGSC0003DMT400056719	Potato	cytosol	29.85	42.33
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	42.16	39.93
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	70.15	39.92
VIT_18s0041g01810.t01	Wine grape	endoplasmic reticulum, golgi	62.69	39.34
PGSC0003DMT400044556	Potato	peroxisome, plastid	39.18	37.77
VIT_18s0041g01800.t01	Wine grape	extracellular, plasma membrane	65.67	36.44
PGSC0003DMT400019561	Potato	endoplasmic reticulum, extracellular	62.69	35.29
PGSC0003DMT400054457	Potato	cytosol	51.49	34.07
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	61.57	33.95
VIT_18s0041g01580.t01	Wine grape	cytosol	55.97	33.71
VIT_18s0041g01590.t01	Wine grape	extracellular	58.58	32.51
VIT_15s0024g01830.t01	Wine grape	endoplasmic reticulum, extracellular	57.09	31.68
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	50.37	28.48
PGSC0003DMT400038240	Potato	golgi	48.88	27.29
PGSC0003DMT400003162	Potato	extracellular	44.03	26.4
PGSC0003DMT400057212	Potato	golgi, plasma membrane	42.16	23.79
PGSC0003DMT400020589	Potato	endoplasmic reticulum	39.18	22.11
PGSC0003DMT400047537	Potato	extracellular, golgi	37.31	21.32
PGSC0003DMT400004951	Potato	extracellular, golgi	36.19	21.0
PGSC0003DMT400066337	Potato	endoplasmic reticulum	36.94	20.71
PGSC0003DMT400002095	Potato	cytosol	34.33	20.67
PGSC0003DMT400052818	Potato	cytosol	31.34	20.29
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	30.22	19.61
VIT_18s0041g01500.t01	Wine grape	extracellular, golgi	63.06	18.11
PGSC0003DMT400009297	Potato	endoplasmic reticulum	29.85	16.63
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	30.6	16.5
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	22.01	14.86
PGSC0003DMT400062367	Potato	extracellular, golgi	26.12	14.37

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1CGN6	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400026080	PGSC:PGSC0003DMG400026080	EnsemblPlants:PGSC0003DMT400067089
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF53	SUPFAM:SSF48264
UniParc:UPI0002952D0F	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400026080]

Coordinates

chr6:-:46414965..46416509

Molecular Weight (calculated)

30684.2 Da

IEP (calculated)

8.952

GRAVY (calculated)

-0.347

Length

268 amino acids

Sequence
(BLAST)

001: MFTVPINLPG TPYNRAIKGG KMVREELMKI IKERKINEKN NHSDHLLSRL ISFSDENGQF MNDAEIYNNI IGLLVASYDT TSAAITFVLK YLAELPKIFN
101: EVYKEQMEIR KSKGEGELLN WDDIQKMKYS WNVACEAIRL MPPAQGAFRE AITDFTFGGF TIPKGWKTFW NVYSTHKNPK YFPEPEKFDP CRFEGSGPAP
201: YTFVPFGGGP RMCPGKEYAR LEILVFMYNV VTNFKLEKLV PHEKIIYQSS PVPLNGLPVR IQPHGNLA

Best Arabidopsis Sequence Match ( AT5G36130.1 )
(BLAST)

001: MRYSWNVACE VMRIVPPLAG TFREAIDHFS FKGFYIPKGW KLYWSATATH KNPEYFPEPE KFEPSRFEGS GPKPYTYVPF GGGSRICPGR EYARLEILIF
101: MHNLVKRFKW EKVFPKENKL VADPAPIPAK GLPIRIFPQS

Arabidopsis Description

Cytochrome P450 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.