Factsheet for PGSC0003DMT400019561

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g021390.2.1	Tomato	endoplasmic reticulum	96.01	96.01
PGSC0003DMT400093941	Potato	cytosol	63.66	86.82
VIT_11s0065g00040.t01	Wine grape	endoplasmic reticulum, extracellular	78.15	77.5
VIT_11s0065g00130.t01	Wine grape	extracellular, golgi	77.52	76.88
PGSC0003DMT400035313	Potato	extracellular, plasma membrane	77.52	75.93
KRH60106	Soybean	endoplasmic reticulum, extracellular	76.47	75.52
VIT_18s0072g00580.t01	Wine grape	extracellular, golgi	75.84	75.21
KRH41388	Soybean	endoplasmic reticulum	75.21	74.27
AT5G36130.1	Thale cress	cytosol	20.59	70.0
PGSC0003DMT400067089	Potato	cytosol	35.29	62.69
AT5G36110.1	Thale cress	endoplasmic reticulum, golgi	62.82	62.68
AT5G36140.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	39.08	58.49
PGSC0003DMT400067171	Potato	endoplasmic reticulum, golgi	54.62	55.2
PGSC0003DMT400008432	Potato	extracellular, plasma membrane	49.79	50.0
PGSC0003DMT400038256	Potato	cytosol	19.54	48.95
PGSC0003DMT400038240	Potato	golgi	47.9	47.5
PGSC0003DMT400054457	Potato	cytosol	39.92	46.91
PGSC0003DMT400056719	Potato	cytosol	17.86	44.97
PGSC0003DMT400003162	Potato	extracellular	39.08	41.61
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	23.95	40.28
PGSC0003DMT400044556	Potato	peroxisome, plastid	22.48	38.49
PGSC0003DMT400057212	Potato	golgi, plasma membrane	36.13	36.21
PGSC0003DMT400004951	Potato	extracellular, golgi	32.14	33.12
PGSC0003DMT400047537	Potato	extracellular, golgi	31.93	32.41
PGSC0003DMT400002095	Potato	cytosol	28.99	31.01
PGSC0003DMT400020589	Potato	endoplasmic reticulum	29.83	29.89
PGSC0003DMT400091698	Potato	cytosol, nucleus, plastid	25.84	29.78
PGSC0003DMT400066337	Potato	endoplasmic reticulum	29.62	29.5
PGSC0003DMT400009297	Potato	endoplasmic reticulum	27.1	26.82
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	26.05	24.95
PGSC0003DMT400052818	Potato	cytosol	21.43	24.64
PGSC0003DMT400069113	Potato	endoplasmic reticulum, extracellular	19.96	23.93
PGSC0003DMT400062367	Potato	extracellular, golgi	21.22	20.74

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102603547	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1AC92
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400007565	PGSC:PGSC0003DMG400007565	EnsemblPlants:PGSC0003DMT400019561	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF66	SUPFAM:SSF48264	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0002955731	RefSeq:XP_006338129.1	SEG:seg	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400007565]

Coordinates

chr5:-:30948307..30950184

Molecular Weight (calculated)

53966.7 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.123

Length

476 amino acids

Sequence
(BLAST)

001: MEFLYVSLVC VFVFLVSLLL LYKNKSGEGL PPGKTGWPVF GESLEFLSTG WKGHPEKFIF DRVAKYSSSV FKTHLLGEEA AVFCGASGNK FLFSNENKLV
101: QAWWPNSVNK VFPSSTQTSS KEEAIKMRKM LPNFFKPEAL QRYVGIMDHI TQRHFASGWE NKEQVVVFPL TKRYTFWLAC RLFLSVEDPN HVAKFADPFD
201: VLASGLISIP IDLPGTPFNR AIKASIFIRK ELVRIIKQRK IDLGEGKASS TQDILSHMLL TCDENGKFMG DLDIADKILG LLIGGHDTAS SACAFIVKYL
301: AELPHIYQRV YTEQMEIAKS KGPGELLRWE DIQKMKYSWN VACEVLRLAP PLQGAFREAL SDFIFNGFSI PKGWKIYWSA NSTHKSGEFF PDPEKFDPSR
401: FEGSGPAPYT FVPFGGGPRM CPGKEYARLE ILVFMHHLVK RFKFEKIIPD EKIIVNPMPI PAKGLPVRLY PHHHKP

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.