Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84682 | Canola | cytosol, peroxisome, vacuole | 98.08 | 98.08 |
| AT2G33520.1 | Thale cress | cytosol, nucleus, peroxisome | 71.15 | 76.29 |
| CDY19499 | Canola | plastid | 37.5 | 49.37 |
| CDY17182 | Canola | cytosol | 7.69 | 34.78 |
Protein Annotations
| EnsemblPlants:CDX79533 | EnsemblPlantsGene:GSBRNA2T00132284001 | ProteinID:CDX79533 | ProteinID:CDX79533.1 | SEG:seg | UniParc:UPI0004EE58E3 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g18690D
Coordinates
chrLK031818:+:576219..577228
Molecular Weight (calculated)
12088.3 Da
IEP (calculated)
6.210
GRAVY (calculated)
-0.586
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYHVSHES NQPQGNPQNI IFFSPSPLYP PVMEAPPPPY PTTSTRFQDY YSGYGQPHQP PLRPYRDEYY GEGEYMGCFP FLRTCLTTLC CCWFVERCCL
101: PSRY
101: PSRY
1: MASYHVSHDS YQSPGPSPLY QPIIEAPPPP YPPTRTRYQD YYGGYGQPHP PPLRPYRSDH EYYGDGEYVG CFPFLRSCLT TLCCCWFVEQ CCFRSRY
Arabidopsis Description
At2g33520 [Source:UniProtKB/TrEMBL;Acc:O22802]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.