Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G02502.1 | Thale cress | endoplasmic reticulum, plasma membrane | 57.89 | 94.29 |
| OQU90276 | Sorghum | endoplasmic reticulum, plasma membrane | 56.14 | 86.49 |
| KRG95809 | Soybean | endoplasmic reticulum, plasma membrane | 54.39 | 83.78 |
| KRH67533 | Soybean | endoplasmic reticulum, plasma membrane | 54.39 | 83.78 |
| HORVU6Hr1G068000.1 | Barley | endoplasmic reticulum, plasma membrane | 52.63 | 83.33 |
| HORVU7Hr1G093100.1 | Barley | endoplasmic reticulum, vacuole | 52.63 | 83.33 |
| HORVU0Hr1G018520.1 | Barley | endoplasmic reticulum, plasma membrane | 50.88 | 80.56 |
| HORVU2Hr1G053080.1 | Barley | endoplasmic reticulum, plasma membrane | 50.88 | 80.56 |
| TraesCS2B01G190800.1 | Wheat | endoplasmic reticulum, extracellular | 50.88 | 80.56 |
| CDY55545 | Canola | cytosol, plasma membrane, plastid | 84.21 | 80.0 |
| GSMUA_Achr8P17680_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 54.39 | 79.49 |
| Os03t0392050-01 | Rice | endoplasmic reticulum, plasma membrane | 52.63 | 78.95 |
| HORVU7Hr1G040490.1 | Barley | endoplasmic reticulum, vacuole | 45.61 | 72.22 |
| Os07t0620500-01 | Rice | endoplasmic reticulum, plasma membrane | 57.89 | 63.46 |
| VIT_08s0007g00090.t01 | Wine grape | plasma membrane | 57.89 | 50.77 |
| Zm00001d022174_P001 | Maize | cytosol | 61.4 | 48.61 |
| GSMUA_Achr1P21400_001 | Banana | extracellular, mitochondrion, peroxisome, plasma membrane | 56.14 | 36.78 |
| CDY10444 | Canola | cytosol | 63.16 | 29.27 |
Protein Annotations
| EnsemblPlants:CDX80827 | EnsemblPlantsGene:GSBRNA2T00134221001 | GO:A0A078CVQ6 | InterPro:Oligosaccaryltransferase | InterPro:Ost4p_sf | PANTHER:PTHR28677 |
| PFAM:PF10215 | ProteinID:CDX80827 | ProteinID:CDX80827.1 | SUPFAM:SSF103464 | TMHMM:TMhelix | UniParc:UPI0004EF4D12 |
| MapMan:18.1.1.5.4 | : | : | : | : | : |
Description
BnaC03g00810D
Coordinates
chrLK031823:-:394746..395863
Molecular Weight (calculated)
6693.4 Da
IEP (calculated)
5.709
GRAVY (calculated)
0.705
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MSMLFRLVEE SKRKFIVPAL SKMFDDQDLG FFANFLGIFI FILVIAYHFV VADPKFE
1: MFDDQDLGFF ANFLGIFIFI LVIAYHFVMA DPKFE
Arabidopsis Description
OST4CDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9SF57]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.