Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90276 | Sorghum | endoplasmic reticulum, plasma membrane | 87.18 | 91.89 |
| AT3G12587.1 | Thale cress | endoplasmic reticulum, plasma membrane | 82.05 | 86.49 |
| Os03t0392050-01 | Rice | endoplasmic reticulum, plasma membrane | 82.05 | 84.21 |
| HORVU6Hr1G068000.1 | Barley | endoplasmic reticulum, plasma membrane | 76.92 | 83.33 |
| HORVU7Hr1G093100.1 | Barley | endoplasmic reticulum, vacuole | 76.92 | 83.33 |
| TraesCS2B01G190800.1 | Wheat | endoplasmic reticulum, extracellular | 74.36 | 80.56 |
| HORVU0Hr1G018520.1 | Barley | endoplasmic reticulum, plasma membrane | 74.36 | 80.56 |
| HORVU2Hr1G053080.1 | Barley | endoplasmic reticulum, plasma membrane | 74.36 | 80.56 |
| KRH21777 | Soybean | endoplasmic reticulum, plasma membrane | 71.79 | 75.68 |
| KRH10592 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 66.67 | 70.27 |
| HORVU7Hr1G040490.1 | Barley | endoplasmic reticulum, vacuole | 64.1 | 69.44 |
| Os07t0620500-01 | Rice | endoplasmic reticulum, plasma membrane | 87.18 | 65.38 |
| CDX80827 | Canola | extracellular, plasma membrane, plastid | 79.49 | 54.39 |
| VIT_08s0007g00090.t01 | Wine grape | plasma membrane | 89.74 | 53.85 |
| CDY55545 | Canola | cytosol, plasma membrane, plastid | 79.49 | 51.67 |
| Zm00001d022174_P001 | Maize | cytosol | 87.18 | 47.22 |
| GSMUA_Achr1P21400_001 | Banana | extracellular, mitochondrion, peroxisome, plasma membrane | 94.87 | 42.53 |
| CDY10444 | Canola | cytosol | 76.92 | 24.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17680_001 | EnsemblPlants:GSMUA_Achr8T17680_001 | EnsemblPlantsGene:GSMUA_Achr8G17680_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Oligosaccaryltransferase | InterPro:Ost4p_sf | PANTHER:PTHR28677 | PFAM:PF10215 | SUPFAM:SSF103464 | TMHMM:TMhelix |
| UniParc:UPI00029631C4 | UniProt:M0TRC1 | MapMan:18.1.1.5.4 | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G17680_001]
Coordinates
chr8:-:18153608..18153913
Molecular Weight (calculated)
4533.5 Da
IEP (calculated)
3.884
GRAVY (calculated)
0.582
Length
39 amino acids
Sequence
(BLAST)
(BLAST)
1: MIDDQDLGFF ANFLGIFIFI LVIAYHYVMA DPKYEGNQC
1: MFDDQDLGFF ANFLGIFIFI LVIAYHFVMA DPKFE
Arabidopsis Description
OST4CDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9SF57]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.