CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001715.1-P	Field mustard	plastid	100.0	100.0
CDX75978	Canola	plastid	89.22	89.76
CDX92260	Canola	plastid	88.32	88.59
CDX99327	Canola	plastid	85.63	85.63
AT3G18680.2	Thale cress	plastid	83.83	75.27
GSMUA_Achr10P...	Banana	plastid	67.66	65.51
Os01t0965400-01	Rice	plastid	66.17	62.96
TraesCS3B01G581900.1	Wheat	plastid	64.37	61.08
Zm00001d042005_P001	Maize	plastid	62.28	60.12
HORVU3Hr1G112590.1	Barley	plastid	66.77	59.95
TraesCS3A01G513500.1	Wheat	plastid	64.07	59.94
TraesCS3D01G522000.1	Wheat	plastid	64.07	59.94
EES02118	Sorghum	plastid	61.98	59.65
Zm00001d011803_P003	Maize	plastid	62.57	56.03
CDX83135	Canola	cytosol	15.57	48.6
CDY00900	Canola	cytosol	40.72	25.28
CDY60158	Canola	nucleus	41.02	25.23

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:3.40.1160.10	MapMan:6.2.3.2	GO:A0A078D266	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
EnsemblPlants:CDX82334	ProteinID:CDX82334	ProteinID:CDX82334.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006221	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0033862
EnsemblPlantsGene:GSBRNA2T00137452001	InterPro:IPR036393	HAMAP:MF_01220_B	PFAM:PF00696	PANTHER:PTHR42833	PANTHER:PTHR42833:SF5
SUPFAM:SSF53633	TIGRFAMs:TIGR02075	UniPathway:UPA00159	UniParc:UPI0002540480	InterPro:Uridylate_kinase_bac	SEG:seg

Description

BnaA03g34870D

Coordinates

chrLK031828:-:647733..649906

Molecular Weight (calculated)

35742.7 Da

IEP (calculated)

8.632

GRAVY (calculated)

-0.093

Length

334 amino acids

Sequence
(BLAST)

001: MSIPLPLTSY SPISTSSSSI SRTSFVPLAP RHRNLFSDQN VTRRVLISCS SSSSSNNGST PEPKNNGSGL NGQSSFPGMP SFDGASNPPL KWRRVLLKVS
101: GEALAGDEQQ NIDPKVTMSI AREVAAVTRL GIEVAIVVGG GNIFRGSTWA GCSGLDRSSA DYIGMMATVM NAIFLQATME SIGIPTRVQT AFRMSEVAEP
201: YIRRRAIRHL EKGRVVIFAA GTGNPFFTTD TAAALRCAEI NAEVVLKATN VDGVFDDDPK RNPNARLHES LTYQEVTSKD LSVMDMTAIT LCQENNIPVV
301: VFNLSEPGNI AKAIKGERVG TLIGGTWNSI VTAT

Best Arabidopsis Sequence Match ( AT3G18680.1 )
(BLAST)

001: MAIPLPLTSC SPISTSSSIS RTSFVPLTLR NRTFFSNQNY SRRVLISCSS SLSSDNGSSP DSMNGNGNGN GSSLNGQSSF PRLPSFDGTS KPPLKWRRVL
101: LKVSGEALAG DEEQNIDPKV TMAIAREVAA VTRLGIEVAI VVGGGNIFRG STWAGCSGLD RSSADYIGML ATVMNAIFLQ ATMESIGIPT RVQTAFRMSE
201: VAEPYIRRRA IRHLEKGRVV IFAAGTGNPF FTTDTAAALR CAEINAEVVL KATNVDGVFD DDPKRNPNAR LLDSLTYQEV TSKDLSVMDM TAITLCQENN
301: IPVVVFNLSE PGNIAKAIKG ERVGTLIGGT WNSIVTTTS

Arabidopsis Description

Amino acid kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.