CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60158	Canola	nucleus	93.31	92.45
Bra029812.1-P	Field mustard	nucleus	92.75	91.73
AT3G10030.1	Thale cress	cytosol	79.55	78.97
KRH20012	Soybean	nucleus	54.28	59.96
KRH32635	Soybean	cytosol	53.16	57.55
VIT_08s0007g04160.t01	Wine grape	cytosol	60.59	56.79
HORVU2Hr1G072140.5	Barley	cytosol	39.96	53.88
PGSC0003DMT400007059	Potato	cytosol	52.42	52.91
Os04t0405800-01	Rice	nucleus	29.74	52.81
Solyc09g008850.2.1	Tomato	cytosol	52.04	52.63
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	49.07	50.09
EES10724	Sorghum	nucleus	46.1	47.78
TraesCS2A01G291700.2	Wheat	nucleus	43.12	46.03
TraesCS2D01G289700.2	Wheat	cytosol	43.12	46.03
TraesCS2B01G308200.2	Wheat	nucleus	42.75	45.54
Zm00001d003836_P005	Maize	nucleus	43.49	44.74
GSMUA_Achr2P20220_001	Banana	nucleus	47.96	44.56
CDX99327	Canola	plastid	25.28	40.72
CDX82334	Canola	plastid	25.28	40.72
CDX75978	Canola	plastid	25.09	40.66
CDX92260	Canola	plastid	25.09	40.54
CDX83135	Canola	cytosol	7.81	39.25
GSMUA_Achr10P...	Banana	plastid	32.34	33.46

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:1.10.10.60	MapMan:15.5.20	Gene3D:3.40.1160.10	GO:A0A078EFP1	InterPro:AceGlu_kinase-like_sf
InterPro:Asp/Glu/Uridylate_kinase	EnsemblPlants:CDY00900	ProteinID:CDY00900	ProteinID:CDY00900.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00110892001	InterPro:IPR036393
PFAM:PF00696	PFAM:PF13837	PANTHER:PTHR42833	PANTHER:PTHR42833:SF1	SUPFAM:SSF53633	UniParc:UPI0004EEE43D
InterPro:Uridylate_kinase	SEG:seg	:	:	:	:

Description

BnaC05g43000D

Coordinates

chrLK031923:-:26362..29009

Molecular Weight (calculated)

58592.5 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.529

Length

538 amino acids

Sequence
(BLAST)

001: MASCDDDFSL LGEDQSNPNQ HHHHHHNQVL HHAPYAPRRF APKLSNQQIH VPHHQSNGDE DDEHHDVVAS SAFHGVNPFS ADENSNPYDN NSNAAVEGGD
101: EDLDANRSRI GGGVRLEKRQ SQEELSDGGT TNGGGSFKRP RTSSSSAGEY RKDREEWSDA AITCLLDAYS DKFTQLNRGN LRGRDWEDVA ATVSERCEKL
201: IKSVEQCKNK IDNLKKRYKL ERHRISSGGT SASHWPWFKK MEEIVGNSMT TKGASDEDRS GSSLGNAAKP ARRYPLVTYN PGVQINNVKS KATSNPRWRR
301: VVLKISGAAL ACTGPNNIDP KIVGLIAREV AMACRLGVEV AIVVGSRNLF CGGTWITATG LDRTTAYHIS MMASVMNSVL LQSSLEKMGV QARLQTGIAV
401: QGVGEPYNRQ RATRHLDKGR VVIFGGIGAT LGNPLLSSDA AAALRAIDIN AEAMVKGTNV EGVYDCHSQD SNATFEHITF HDLASRGLTT MDTMALNFCE
501: ENSIPVVVFN FLEAGNITKA LCGEQVGTLI DRTGRGVS

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.