Factsheet for VIT_08s0007g04160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20012	Soybean	nucleus	59.41	70.02
KRH32635	Soybean	cytosol	59.41	68.61
VIT_13s0074g00240.t01	Wine grape	cytosol	57.14	65.08
Os04t0405800-01	Rice	nucleus	33.97	64.36
Solyc09g008850.2.1	Tomato	cytosol	59.58	64.29
PGSC0003DMT400007059	Potato	cytosol	59.58	64.17
AT3G10030.1	Thale cress	cytosol	57.84	61.25
CDY00900	Canola	cytosol	56.79	60.59
HORVU2Hr1G072140.5	Barley	cytosol	41.81	60.15
CDY60158	Canola	nucleus	56.45	59.67
Bra029812.1-P	Field mustard	nucleus	56.27	59.38
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	51.92	56.55
VIT_04s0044g00890.t01	Wine grape	cytosol	25.09	56.47
EES10724	Sorghum	nucleus	47.91	52.99
TraesCS2A01G291700.2	Wheat	nucleus	46.52	52.98
TraesCS2D01G289700.2	Wheat	cytosol	46.52	52.98
TraesCS2B01G308200.2	Wheat	nucleus	45.99	52.28
Zm00001d003836_P005	Maize	nucleus	44.77	49.14
GSMUA_Achr2P20220_001	Banana	nucleus	49.48	49.05
GSMUA_Achr10P...	Banana	plastid	35.19	38.85

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:1.10.10.60	EntrezGene:100264768	wikigene:100264768	MapMan:15.5.20	Gene3D:3.40.1160.10
InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	ProteinID:CCB55379	ProteinID:CCB55379.1	ncoils:Coil	UniProt:F6HKF7
EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0033862	GO:GO:0046939
GO:GO:0046940	InterPro:IPR036393	EntrezGene:LOC100264768	wikigene:LOC100264768	HAMAP:MF_01220_B	PFAM:PF00696
PFAM:PF13837	PANTHER:PTHR42833	PANTHER:PTHR42833:SF1	SUPFAM:SSF53633	UniParc:UPI00015C94A6	InterPro:Uridylate_kinase
InterPro:Uridylate_kinase_bac	ArrayExpress:VIT_08s0007g04160	EnsemblPlantsGene:VIT_08s0007g04160	EnsemblPlants:VIT_08s0007g04160.t01	unigene:Vvi.22078	RefSeq:XP_002277826
RefSeq:XP_002277826.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:18147395..18156924

Molecular Weight (calculated)

62767.0 Da

IEP (calculated)

7.015

GRAVY (calculated)

-0.508

Length

574 amino acids

Sequence
(BLAST)

001: MASCDDDFSL LGDDTTQTNP SHHHHHHLPH HHHLHHPHHH HQPFASARFS PKPIQIHAPP PPPPQPILNH SAVAAGGSPE KIASGVGEEE DDTDGYTDAA
101: FCTQGDTKCP AAFPDVNPFS EEDPTPFEED SDPNKARGSV RNEKRKDREE LSDGGTACCY RKQKIPGGGA VSTTSTAAGG GEYRNEYRKD REEWSDTAIG
201: CLLEAYMEKF TQLNRGNLRG RDWEEVAAIV SERCDKQSKS VEQCKNKVDN LKKRYKLERH RMSNGGVSAS HWPWFKKMEE IVGNSLPVKA VSDEDKSIVA
301: SGNMLRQSKR FAMATPSPVG QINNVKSKSI SNPRWRRVVF KISGAALAGT GPHNIDPKVA MLIAREVAVA CRLGVEVAIV VGGRNFFCGD TWVTATGLDR
401: PTAYQIGMMA TVMNSILLQS ALEKMGVQTR VQTAFAMQEV AEPYSRQRAI RHLEKGRVVI FGGIGAGTGN PLFSTDTAAA LRASEINADA VLKGTNVDGV
501: YDCNSRNNNV TFEHISFREL VSSGATSMDM MAMTFCEENR IPVVVFNLLE PGNISRALCG DQVGTLIDQT GRIS

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.