Factsheet for VIT_13s0074g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34715	Soybean	nucleus	64.68	66.94
KRG92060	Soybean	cytosol, nucleus	52.78	66.67
Os04t0405800-01	Rice	nucleus	38.49	64.03
HORVU2Hr1G072140.5	Barley	cytosol	48.41	61.15
VIT_04s0044g00890.t01	Wine grape	cytosol	28.97	57.25
VIT_08s0007g04160.t01	Wine grape	cytosol	65.08	57.14
EES10724	Sorghum	nucleus	53.37	51.83
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	53.97	51.61
TraesCS2A01G291700.2	Wheat	nucleus	50.99	50.99
TraesCS2D01G289700.2	Wheat	cytosol	50.99	50.99
TraesCS2B01G308200.2	Wheat	nucleus	50.79	50.69
GSMUA_Achr2P20220_001	Banana	nucleus	54.96	47.84
Zm00001d003836_P005	Maize	nucleus	49.4	47.61
GSMUA_Achr10P...	Banana	plastid	35.52	34.42

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:1.10.10.60	EntrezGene:100260933	wikigene:100260933	MapMan:15.5.20	Gene3D:3.40.1160.10
InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	ProteinID:CCB62316	ProteinID:CCB62316.1	ncoils:Coil	UniProt:F6I5U8
EMBL:FN596753	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0033862	GO:GO:0046939	GO:GO:0046940
InterPro:IPR036393	EntrezGene:LOC100260933	wikigene:LOC100260933	HAMAP:MF_01220_B	PFAM:PF00696	PFAM:PF13837
PANTHER:PTHR42833	PANTHER:PTHR42833:SF3	SUPFAM:SSF53633	UniParc:UPI00015CB315	InterPro:Uridylate_kinase_bac	ArrayExpress:VIT_13s0074g00240
EnsemblPlantsGene:VIT_13s0074g00240	EnsemblPlants:VIT_13s0074g00240.t01	RefSeq:XP_002268973	RefSeq:XP_002268973.1	SEG:seg	:

Description

No Description!

Coordinates

chr13:+:7685257..7697691

Molecular Weight (calculated)

55055.7 Da

IEP (calculated)

7.383

GRAVY (calculated)

-0.463

Length

504 amino acids

Sequence
(BLAST)

001: MASCNDDFPL IEDDGPHHAL THHHHHHHQQ QQHQVFPSAS TEKVSGAGDS DADADSGGAA FYSQAHDVNP FAVVAAAEES DPAKSGASTP NGKRNPYYYK
101: KLKPSGASES GSGEYRVDYR KDREEWSDSA ISCLLEAYTE KFTQLNRGNL RGRDWEEVAE IVSERCDKQK SCKSVEQCKN KIDNLKKRYK VELQRMNSGG
201: LPVSHWHWFK KIEAIVGNSP SFKTGSDEDR SGGASSYMLR QSKRYAPSTV TFANNMKPKT LSNPKWRRVV FKISGAALAG NCQNIDPKVA MQIAREVTTA
301: CRLGVEVAIV VGGRNFFCGD SWVSATGLDR PTAYQIGMMA TVMNSILLQS ALEKLGVQTR VQSAFPTPEV AEPYSRQRAI RHLEKGRVVI FGGIGAGTGN
401: PLFTTDTAAA LRASEINADA VLKGTNVNGI YDCHSANDNV VLDHLSFREV ASRGISSMDM MAITYCEENG IPVVIFNLLE PGNISRALCG DQVGTLMDQA
501: GRIS

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.