CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003836_P005	Maize	nucleus	84.59	83.94
Os04t0405800-01	Rice	nucleus	48.17	82.51
HORVU2Hr1G072140.5	Barley	cytosol	61.85	80.45
TraesCS2D01G289700.2	Wheat	cytosol	70.71	72.82
TraesCS2A01G291700.2	Wheat	nucleus	70.33	72.42
TraesCS2B01G308200.2	Wheat	nucleus	69.94	71.88
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	56.45	55.6
VIT_13s0074g00240.t01	Wine grape	cytosol	51.83	53.37
KRH34715	Soybean	nucleus	49.71	52.98
KRG92060	Soybean	cytosol, nucleus	40.66	52.88
KRH20012	Soybean	nucleus	49.33	52.57
KRH32635	Soybean	cytosol	49.52	51.71
GSMUA_Achr2P20220_001	Banana	nucleus	53.76	48.19
VIT_08s0007g04160.t01	Wine grape	cytosol	52.99	47.91
PGSC0003DMT400007059	Potato	cytosol	48.17	46.9
AT3G10030.1	Thale cress	cytosol	48.55	46.49
Solyc09g008850.2.1	Tomato	cytosol	47.59	46.43
Bra029812.1-P	Field mustard	nucleus	48.55	46.32
CDY00900	Canola	cytosol	47.78	46.1
CDY60158	Canola	nucleus	48.17	46.04
EES02118	Sorghum	plastid	28.32	42.36
GSMUA_Achr10P...	Banana	plastid	37.76	37.69

Protein Annotations

KEGG:00240+2.7.4.22	MapMan:15.5.20	Gene3D:3.40.1160.10	EntrezGene:8072072	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
UniProt:C5YFR6	ncoils:Coil	EnsemblPlants:EES10724	ProteinID:EES10724	ProteinID:EES10724.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0033862	GO:GO:0046939	GO:GO:0046940	InterPro:IPR036393
HAMAP:MF_01220_B	PFAM:PF00696	PFAM:PF13837	PANTHER:PTHR42833	PANTHER:PTHR42833:SF1	EnsemblPlantsGene:SORBI_3006G065800
SUPFAM:SSF53633	UniParc:UPI0001A86EA5	InterPro:Uridylate_kinase	InterPro:Uridylate_kinase_bac	RefSeq:XP_002446396.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:42573605..42580030

Molecular Weight (calculated)

55266.3 Da

IEP (calculated)

7.482

GRAVY (calculated)

-0.410

Length

519 amino acids

Sequence
(BLAST)

001: MASCDDDFGL LGDDAHQPAT PPPAPPIAQQ PAPPPSQQAA HPFSFTVAPA GVAAGAGSFA QVQEDSNHHA ESGKPAQHAK RGRERAEEFS SDGGEYCSYI
101: NSSGSGGGGK KGCGGGGISS VRDLYRKDRE EWTDGAISSL LDAYTDRFEQ LNRGHLRGRD WEDVASVVTD GKGKTTGGKS VEQCKNKIDN LKKRYKVECQ
201: RLTSSGGGAV SHWPWFKKME QIVGDSMSPA SSKPLAAAED VKPRQQQQQH GSKRYPLSST GPPTGVGSSR TNPLSNPRWK RVLLKIGGTA LCGEAPQNVD
301: PKVIMLIARE VQVACHHGVE VAIVLGGRNI FCGDNWVAAT GTDRASTYPI GMMASVMNSV LLQASLEKIG VETRVQTALM MQEVAEPYIR RRAIRHLEKG
401: RVVIFGGIGA GTGNPLFTTD TAAALRASEI NADVVLKGIV GDDESGCPPR SNSNASFEHI SFRELAARGI TKMDMTAVTC CEENNIPVVI FNMLEPGNIS
501: RAICGDQIGT LVDQSGRIT

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.