Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029812.1-P | Field mustard | nucleus | 82.84 | 82.54 |
| CDY60158 | Canola | nucleus | 82.29 | 82.14 |
| CDY00900 | Canola | cytosol | 78.97 | 79.55 |
| KRH20012 | Soybean | nucleus | 54.8 | 60.99 |
| KRH32635 | Soybean | cytosol | 54.43 | 59.36 |
| VIT_08s0007g04160.t01 | Wine grape | cytosol | 61.25 | 57.84 |
| Os04t0405800-01 | Rice | nucleus | 30.81 | 55.12 |
| Solyc09g008850.2.1 | Tomato | cytosol | 53.69 | 54.7 |
| PGSC0003DMT400007059 | Potato | cytosol | 53.51 | 54.41 |
| HORVU2Hr1G072140.5 | Barley | cytosol | 40.04 | 54.39 |
| GSMUA_Achr6P13420_001 | Banana | cytosol, nucleus, plastid | 50.55 | 51.99 |
| EES10724 | Sorghum | nucleus | 46.49 | 48.55 |
| TraesCS2A01G291700.2 | Wheat | nucleus | 43.17 | 46.43 |
| TraesCS2D01G289700.2 | Wheat | cytosol | 43.17 | 46.43 |
| TraesCS2B01G308200.2 | Wheat | nucleus | 42.8 | 45.94 |
| Zm00001d003836_P005 | Maize | nucleus | 44.1 | 45.7 |
| GSMUA_Achr2P20220_001 | Banana | nucleus | 47.97 | 44.91 |
| AT3G18680.2 | Thale cress | plastid | 26.94 | 39.25 |
| GSMUA_Achr10P... | Banana | plastid | 32.66 | 34.04 |
Protein Annotations
| KEGG:00240+2.7.4.22 | Gene3D:1.10.10.60 | MapMan:15.5.20 | Gene3D:3.40.1160.10 | EntrezGene:820164 | UniProt:A0A178VBU4 |
| ProteinID:AEE74851.1 | EMBL:AF375431 | ArrayExpress:AT3G10030 | EnsemblPlantsGene:AT3G10030 | RefSeq:AT3G10030 | TAIR:AT3G10030 |
| RefSeq:AT3G10030-TAIR-G | EnsemblPlants:AT3G10030.1 | TAIR:AT3G10030.1 | EMBL:AY120687 | InterPro:AceGlu_kinase-like_sf | InterPro:Asp/Glu/Uridylate_kinase |
| Unigene:At.28740 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006221 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009041 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0046939 | GO:GO:0046940 | InterPro:IPR036393 | RefSeq:NP_566366.1 | ProteinID:OAP03264.1 | PFAM:PF00696 |
| PFAM:PF13837 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR42833 |
| PANTHER:PTHR42833:SF1 | UniProt:Q94JR1 | SUPFAM:SSF53633 | UniParc:UPI00000A786C | InterPro:Uridylate_kinase | SEG:seg |
Description
AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
Coordinates
chr3:-:3092016..3095025
Molecular Weight (calculated)
59251.1 Da
IEP (calculated)
6.558
GRAVY (calculated)
-0.543
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.