CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20012	Soybean	nucleus	85.92	87.68
VIT_08s0007g04160.t01	Wine grape	cytosol	68.61	59.41
Os04t0405800-01	Rice	nucleus	35.61	58.42
KRG92060	Soybean	cytosol, nucleus	46.68	58.15
KRH34715	Soybean	nucleus	56.14	57.29
PGSC0003DMT400007059	Potato	cytosol	60.56	56.47
Solyc09g008850.2.1	Tomato	cytosol	60.36	56.39
HORVU2Hr1G072140.5	Barley	cytosol	44.87	55.89
AT3G10030.1	Thale cress	cytosol	59.36	54.43
CDY60158	Canola	nucleus	58.35	53.41
Bra029812.1-P	Field mustard	nucleus	58.35	53.31
CDY00900	Canola	cytosol	57.55	53.16
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	55.33	52.18
EES10724	Sorghum	nucleus	51.71	49.52
TraesCS2D01G289700.2	Wheat	cytosol	49.5	48.81
TraesCS2A01G291700.2	Wheat	nucleus	49.3	48.61
TraesCS2B01G308200.2	Wheat	nucleus	48.69	47.92
Zm00001d003836_P005	Maize	nucleus	49.5	47.04
GSMUA_Achr2P20220_001	Banana	nucleus	52.92	45.42
KRH59550	Soybean	plastid	28.37	42.6
KRH43401	Soybean	plastid	27.77	42.46
KRH13440	Soybean	cytosol	6.04	35.71
GSMUA_Achr10P...	Banana	plastid	37.02	35.38
KRH57953	Soybean	cytosol	6.04	30.0

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:1.10.10.60	EntrezGene:100805176	MapMan:15.5.20	Gene3D:3.40.1160.10	EMBL:ACUP02006145
InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G065100	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006221
GO:GO:0008150	GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0033862	GO:GO:0046939	GO:GO:0046940	UniProt:I1L966	InterPro:IPR036393
EnsemblPlants:KRH32635	ProteinID:KRH32635	ProteinID:KRH32635.1	HAMAP:MF_01220_B	PFAM:PF00696	PFAM:PF13837
PANTHER:PTHR42833	PANTHER:PTHR42833:SF1	SUPFAM:SSF53633	UniParc:UPI000233CAA3	InterPro:Uridylate_kinase	InterPro:Uridylate_kinase_bac
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:6219832..6224963

Molecular Weight (calculated)

54132.4 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.411

Length

497 amino acids

Sequence
(BLAST)

001: MASCDDDDDF SLLRDDTHHH LHQPYAPHHH HFSPSAVSVA SASSVPPKPA AAADDDAEDF SNPFDEDDDG EKRKERDEIG EGAASYGFNN KRSKTTAPSN
101: GVGAVSGGAE YRKDREEWSD TAIVCLLEAY TEKFTQLNRG NLRGRDWEEV AAVVSERCEN QSKSVEQCKN KVDNLKKRYK LERHRMSSGC ISTSHWPWFK
201: QLEQIVGNSL PAKFSDEDKA VISAGTSPRQ SKRYGVATPS TGGPANSMKS KALSNSRWRR VVLKISGAAL TGSDTCNIDP KVAMLVSREV AIASRLGVEV
301: AIVVGGRNFF SGEAWVNVTG LERCTAYQVG MMATVMNSIL LQSTLEKMGV QTRVQTSVAM QEFAEPYNRQ RAIRHLEKGR VVIFGGIGFG AGTPLFSTDI
401: AAALRASELN AEAVLKGTNV DGVYDCNSRD NNFTFEHISF RELGSRGVTS MDMSALTFCE ENAIPVVVFN LLEPGNISKA LCGEQVGTLI DQTGAIS

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.