Factsheet for PGSC0003DMT400007059

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g008850.2.1	Tomato	cytosol	94.75	94.92
KRH20012	Soybean	nucleus	56.85	62.22
KRH32635	Soybean	cytosol	56.47	60.56
VIT_08s0007g04160.t01	Wine grape	cytosol	64.17	59.58
Os04t0405800-01	Rice	nucleus	32.27	56.77
HORVU2Hr1G072140.5	Barley	cytosol	41.28	55.14
AT3G10030.1	Thale cress	cytosol	54.41	53.51
GSMUA_Achr6P13420_001	Banana	cytosol, nucleus, plastid	52.72	53.32
CDY00900	Canola	cytosol	52.91	52.42
CDY60158	Canola	nucleus	52.91	51.93
Bra029812.1-P	Field mustard	nucleus	52.91	51.84
EES10724	Sorghum	nucleus	46.9	48.17
TraesCS2A01G291700.2	Wheat	nucleus	45.4	48.02
TraesCS2B01G308200.2	Wheat	nucleus	45.4	47.92
TraesCS2D01G289700.2	Wheat	cytosol	45.22	47.82
GSMUA_Achr2P20220_001	Banana	nucleus	50.47	46.46
Zm00001d003836_P005	Maize	nucleus	44.47	45.32
PGSC0003DMT400080512	Potato	plastid	26.83	43.87
GSMUA_Achr10P...	Banana	plastid	33.77	34.62

Protein Annotations

KEGG:00240+2.7.4.22	Gene3D:1.10.10.60	EntrezGene:102600206	MapMan:15.5.20	Gene3D:3.40.1160.10	InterPro:AceGlu_kinase-like_sf
InterPro:Asp/Glu/Uridylate_kinase	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152
GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0033862
GO:GO:0046939	GO:GO:0046940	InterPro:Glu/AcGlu_kinase	InterPro:IPR036393	UniProt:M0ZSE6	HAMAP:MF_01220_B
PFAM:PF00696	PFAM:PF13837	EnsemblPlantsGene:PGSC0003DMG400002727	PGSC:PGSC0003DMG400002727	EnsemblPlants:PGSC0003DMT400007059	PRINTS:PR00474
PANTHER:PTHR42833	PANTHER:PTHR42833:SF1	SUPFAM:SSF53633	UniParc:UPI000296BF8A	InterPro:Uridylate_kinase	InterPro:Uridylate_kinase_bac
RefSeq:XP_006341185.1	SEG:seg	:	:	:	:

Description

Homeodomain-like; Uridylate kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400002727]

Coordinates

chr9:-:4094029..4101896

Molecular Weight (calculated)

57986.2 Da

IEP (calculated)

6.671

GRAVY (calculated)

-0.445

Length

533 amino acids

Sequence
(BLAST)

001: MASCDDDFSL LGDDNAAVAV TPTTTTTANP TYHHQPFSSV RYKPVQIHPP PISAGSPKNI SGDDEDGDGY SDNNAQSYHI GMNPYENDSI PFENDTNVNR
101: SRGKLSNDKR ADREDIGDNG TPYSYKRSKI SSSSGSGSGE YRKDREEWSD TAIACLLEAY MEKFVQLNRG NLRGRDWEEV AAMVSERCEK QSKSVEQCKN
201: KVDNLKKRYK LERHRMSNGG LTISHWPWFK QMEQIVGNSV SVKATSEEDK AIVPVNNSST GRQSKRYGTA VPSPSGQIVK AKSSMSPRWR RVVLKISGAA
301: LAGMTPNTND ANNIDPKVAT LVATEVSIAC RLGIEVAIVV GGRNFFCGDT WVTSTGLDRC TAYQIGMMAT LMNSILLQSA LEKVGVQTRV QSAFNMPELT
401: EPYSRQRAMR HLEKGRVVIF GGIGAGTGNP LFSTDTVAAL RASEIHADAV LKATNVDGVY VCDAQNNNVV AEHISFRELV SGGDSPLDLM AVTLCEENAI
501: PVVIFNLHGP GNISRALCGE QVGTLIDQTG RVS

Best Arabidopsis Sequence Match ( AT3G10030.1 )
(BLAST)

001: MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED
101: EDLGANRSRI GGVRVEKRQS QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL NRGNLRGRDW EEVASSVSER
201: CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP
301: RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT
401: AISVQGVGEP YNRQRATRHL DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE HISFQDLASR GLTSMDTMAL
501: NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG VS

Arabidopsis Description

AT3g10030/T22K18_15 [Source:UniProtKB/TrEMBL;Acc:Q94JR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.