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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
ATCG00900.1 Thale cress cytosol 100.0 100.0
CDY19673 Canola cytosol 100.0 100.0
CDY45545 Canola cytosol 100.0 100.0
CDY44968 Canola cytosol 25.16 97.5
VIT_00s0173g00170.t01 Wine grape mitochondrion 76.13 92.91
KRH35362 Soybean mitochondrion 34.84 75.0
GSMUA_Achr11P... Banana plastid 21.29 55.93
Solyc01g017400.1.1 Tomato cytosol 59.35 42.4
Protein Annotations
Gene3D:1.10.455.10MapMan:17.7.2.2.7ProteinID:AAD27618.1ProteinID:ACY66241.1ProteinID:ACY66294.1ProteinID:AIK29050.1
ProteinID:AIK29064.1ProteinID:AIZ06126.1ProteinID:AIZ06140.1ProteinID:AKD00135.1ProteinID:AKD00149.1ProteinID:ASY95060.1
ProteinID:ASY95075.1EnsemblPlants:CDX95213ProteinID:CDX95213ProteinID:CDX95213.1ProteinID:CDY19673.1ProteinID:CDY45545.1
GO:D1L8T4UniProt:D1L8T4GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735
GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009987GO:GO:0015935GO:GO:0019538GO:GO:0019843GO:GO:0030529
EnsemblPlantsGene:GSBRNA2T00100816001InterPro:IPR036823HAMAP:MF_00480_BUniProt:P61842PFAM:PF00177PIRSF:PIRSF002122
ScanProsite:PS00052PANTHER:PTHR11205PANTHER:PTHR11205:SF19InterPro:Ribosomal_S5/S7InterPro:Ribosomal_S7_CSInterPro:Ribosomal_S7_bac/org-type
InterPro:Ribosomal_S7_domInterPro:Ribosomal_S7_dom_sfSUPFAM:SSF47973TIGRFAMs:TIGR01029UniParc:UPI00001349BF:
Description
BnaC09g16570DRibosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:D1L8T4]
Coordinates
chrLK031887:-:583117..583584
Molecular Weight (calculated)
17358.3 Da
IEP (calculated)
11.849
GRAVY (calculated)
-0.581
Length
155 amino acids
Sequence
(BLAST)
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
Best Arabidopsis Sequence Match ( ATCG01240.1 )
(BLAST)
001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR
Arabidopsis Description
RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.