CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
ATCG01240.1	Thale cress	cytosol	100.0	100.0
CDX95213	Canola	cytosol	100.0	100.0
CDY45545	Canola	cytosol	100.0	100.0
CDY44968	Canola	cytosol	25.16	97.5
VIT_00s0173g00170.t01	Wine grape	mitochondrion	76.13	92.91
KRH35362	Soybean	mitochondrion	34.84	75.0
GSMUA_Achr11P...	Banana	plastid	21.29	55.93
Solyc01g017400.1.1	Tomato	cytosol	59.35	42.4

Protein Annotations

Gene3D:1.10.455.10	MapMan:17.7.2.2.7	ProteinID:AAD27618.1	ProteinID:ACY66241.1	ProteinID:ACY66294.1	ProteinID:AIK29050.1
ProteinID:AIK29064.1	ProteinID:AIZ06126.1	ProteinID:AIZ06140.1	ProteinID:AKD00135.1	ProteinID:AKD00149.1	ProteinID:ASY95060.1
ProteinID:ASY95075.1	EnsemblPlants:CDY19673	ProteinID:CDY19673	ProteinID:CDY19673.1	ProteinID:CDY45545.1	GO:D1L8T4
UniProt:D1L8T4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009579	GO:GO:0009987	GO:GO:0015935	GO:GO:0016020	GO:GO:0019538	GO:GO:0019843
GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00009383001	InterPro:IPR036823	HAMAP:MF_00480_B	UniProt:P61842	PFAM:PF00177
PIRSF:PIRSF002122	ScanProsite:PS00052	PANTHER:PTHR11205	PANTHER:PTHR11205:SF19	InterPro:Ribosomal_S5/S7	InterPro:Ribosomal_S7_CS
InterPro:Ribosomal_S7_bac/org-type	InterPro:Ribosomal_S7_dom	InterPro:Ribosomal_S7_dom_sf	SUPFAM:SSF47973	TIGRFAMs:TIGR01029	UniParc:UPI00001349BF

Description

BnaC09g29290DRibosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:D1L8T4]

Coordinates

chrLK032099:+:314841..316121

Molecular Weight (calculated)

17358.3 Da

IEP (calculated)

11.849

GRAVY (calculated)

-0.581

Length

155 amino acids

Sequence
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Best Arabidopsis Sequence Match ( ATCG01240.1 )
(BLAST)

001: MSRRGTAEEK TAKSDPIYRN RLVNMLVNRI LKHGKKSLAY QIIYRALKKI QQKTETNPLS VLRQAIRGVT PDIAVKARRV GGSTHQVPIE IGSTQGKALA
101: IRWLLGASRK RPGRNMAFKL SSELVDAAKG SGDAIRKKEE THRMAEANRA FAHFR

Arabidopsis Description

RPS7-A30S ribosomal protein S7, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q6KGZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.