CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18388	Canola	extracellular	96.13	92.29
Bra017121.1-P	Field mustard	extracellular	95.54	91.71
CDY54418	Canola	extracellular	95.54	91.71
AT2G38380.1	Thale cress	extracellular	83.04	79.94
AT2G38390.1	Thale cress	extracellular	82.44	79.37
CDY66100	Canola	extracellular	41.37	77.65
CDY70137	Canola	extracellular	79.17	76.44
CDY65894	Canola	extracellular	78.57	75.64
CDY18387	Canola	extracellular	76.79	73.71
CDY54420	Canola	extracellular	76.49	73.43
CDY42311	Canola	cytosol	5.36	72.0
CDY70745	Canola	extracellular	46.73	70.09
CDY07731	Canola	extracellular	53.87	69.08
CDY37218	Canola	extracellular	57.14	64.0
CDX83066	Canola	extracellular	66.37	63.9
CDX68508	Canola	extracellular	66.07	63.61
CDY05024	Canola	extracellular	65.48	62.5
CDY05905	Canola	extracellular, plastid	65.77	62.43
CDY08111	Canola	extracellular	64.88	61.58
CDX81458	Canola	plastid	67.86	60.96
CDX75140	Canola	extracellular	63.69	60.8
CDY08110	Canola	extracellular, plastid	63.39	60.34
CDY54347	Canola	plasma membrane	63.1	60.23
CDY05904	Canola	extracellular	62.8	59.77
CDX98949	Canola	extracellular	52.08	51.78
CDX70075	Canola	extracellular	51.19	50.89
CDX98950	Canola	extracellular	52.08	48.88
CDX70074	Canola	extracellular	51.79	48.6
CDY35842	Canola	extracellular	47.62	48.34
CDY42313	Canola	extracellular	46.43	48.15
CDY44951	Canola	extracellular	46.13	47.84
CDY44950	Canola	extracellular	46.73	47.72
CDX92492	Canola	extracellular	46.13	47.4
CDX92493	Canola	extracellular	46.43	47.27
CDY42312	Canola	extracellular	36.61	46.95
CDY35844	Canola	extracellular	45.83	46.67
CDY68097	Canola	extracellular	44.94	45.76
CDY35845	Canola	extracellular	44.64	45.45
CDY45216	Canola	extracellular	44.64	44.51
CDY46313	Canola	extracellular	44.05	44.05
CDY65385	Canola	extracellular	44.05	43.92
CDY64926	Canola	extracellular	43.15	43.81
CDX69223	Canola	extracellular	43.15	43.81
CDY12580	Canola	extracellular, plasma membrane, vacuole	45.24	43.8
CDY25139	Canola	extracellular	43.75	43.75
CDY25140	Canola	extracellular	43.75	43.75
CDX81401	Canola	extracellular	43.75	43.62
CDY59700	Canola	extracellular	42.56	43.47
CDX75574	Canola	extracellular	42.56	43.2
CDY14598	Canola	cytosol	18.75	43.15
CDX84214	Canola	extracellular	41.37	43.03
CDY47953	Canola	extracellular, plasma membrane, vacuole	44.35	42.94
CDX77234	Canola	extracellular	42.26	42.9
CDY65368	Canola	extracellular	40.77	42.55
CDY13763	Canola	cytosol	39.58	42.36
CDX77970	Canola	extracellular	41.67	41.54
CDY25594	Canola	extracellular	39.88	40.73
CDX89462	Canola	extracellular	39.58	40.43
CDX76927	Canola	extracellular	39.58	40.3
CDX73762	Canola	extracellular	40.18	40.06
CDY38693	Canola	extracellular	39.58	39.7
CDY33582	Canola	extracellular	39.58	39.7
CDX95981	Canola	extracellular	39.58	39.7
CDY16509	Canola	extracellular	43.45	39.57
CDY45848	Canola	extracellular	39.29	39.29
CDY07363	Canola	extracellular	38.69	38.92
CDY04260	Canola	extracellular	38.69	38.92
CDX81562	Canola	extracellular	38.69	38.69
CDY34446	Canola	extracellular, golgi	41.07	37.5
CDY32232	Canola	extracellular, golgi	40.48	36.96
CDX75576	Canola	mitochondrion	42.26	17.01

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078IYK9	UniProt:A0A078IYK9
EnsemblPlants:CDY54419	ProteinID:CDY54419	ProteinID:CDY54419.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00014086001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF22	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI0004EDF27A

Description

BnaC04g56600DPeroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078IYK9]

Coordinates

chrLK033318:+:47162..49084

Molecular Weight (calculated)

37556.7 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.220

Length

336 amino acids

Sequence
(BLAST)

001: MISGLKMCLE QPVFAQLRPD FYFRTCRQVF DIIGNVIVDE LSSDPRIAAS LLRLHFHDCF VNGCDASILL DNSTSFRTEK DAAPNANSAR GFDVIDRMKD
101: EIELACPRTV SCADILTIAS QISVLLSGGP WWPVPLGRRD SLQAFFDLAN TALPSPFFTL DQLKKSFADV GLNRLSDLVA LSGGHTFGRA QCQFVTPRLY
201: NFNGTNRPDP SLNPTYRDQL RRLCPQNGNG TVLVNFDPVT PDGFDQQYYT NLRQGKGLIQ SDQELFSTPR ADTIPLVEQY SNNRFVFFQA FAEAMIRMGN
301: LKPLTGTQGE IRQNCRVVNS RIRSVKNEDH GVVSSI

Best Arabidopsis Sequence Match ( AT2G38380.1 )
(BLAST)

001: MGFSPSFSCS AIGALILGCL LLQASNSNAQ LRPDFYFGTC PFVFDIIGNI IVDELQTDPR IAASLLRLHF HDCFVRGCDA SILLDNSTSF RTEKDAAPNA
101: NSARGFNVID RMKVALERAC PGRVSCADIL TIASQISVLL SGGPWWPVPL GRRDSVEAFF ALANTALPSP FFNLTQLKTA FADVGLNRTS DLVALSGGHT
201: FGRAQCQFVT PRLYNFNGTN SPDPSLNPTY LVELRRLCPQ NGNGTVLVNF DVVTPDAFDS QYYTNLRNGK GLIQSDQELF STPGADTIPL VNQYSSDMSV
301: FFRAFIDAMI RMGNLRPLTG TQGEIRQNCR VVNPRIRVVE NDDGVVSSI

Arabidopsis Description

PER22Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178VXE4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.