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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES03274

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G43690.1 EES03274 AT5G45900.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033516_P002 Maize cytosol 86.09 87.87
CDX80986 Canola cytosol 3.48 60.0
KXG34183 Sorghum cytosol 49.28 50.75
CDY34677 Canola cytosol 2.9 50.0
OQU88233 Sorghum cytosol 48.41 50.0
EES04272 Sorghum cytosol 47.25 49.7
CDY04207 Canola cytosol 24.93 48.31
OQU88232 Sorghum cytosol 40.58 47.3
VIT_17s0000g10200.t01 Wine grape cytosol 38.55 42.49
CDY60437 Canola cytosol 36.81 41.64
PGSC0003DMT400072875 Potato cytosol 28.7 41.25
CDX89350 Canola nucleus 37.1 41.03
CDY49688 Canola cytosol 39.71 41.02
VIT_13s0084g00250.t01 Wine grape cytosol 39.42 40.96
Bra036913.1-P Field mustard cytosol 39.71 40.9
CDY29781 Canola cytosol 39.71 40.9
VIT_13s0084g00240.t01 Wine grape cytosol 39.42 40.84
OQU85625 Sorghum cytosol 39.71 40.77
CDY45712 Canola cytosol 39.42 40.72
Bra009164.1-P Field mustard cytosol 35.94 40.66
Solyc05g011840.2.1 Tomato cytosol 32.75 40.65
Bra004046.1-P Field mustard cytosol 38.26 40.49
AT4G26280.1 Thale cress cytosol 36.81 40.45
Bra026450.1-P Field mustard nucleus 38.55 40.43
Bra034065.1-P Field mustard cytosol 37.39 40.31
CDY42798 Canola cytosol 39.13 40.3
CDX80987 Canola nucleus 34.78 40.13
Bra034066.1-P Field mustard nucleus 38.26 40.12
CDY22190 Canola nucleus 38.26 40.12
CDY11353 Canola nucleus 34.2 40.0
Bra026540.1-P Field mustard cytosol 36.81 39.94
AT1G13420.1 Thale cress nucleus 38.26 39.88
AT5G43690.1 Thale cress cytosol 38.26 39.88
CDY42747 Canola cytosol 35.94 39.87
CDX94351 Canola cytosol 35.94 39.74
Bra027963.1-P Field mustard nucleus 38.55 39.58
CDY42346 Canola nucleus 38.55 39.58
AT2G27570.1 Thale cress nucleus 31.3 39.56
Solyc11g027800.1.1 Tomato cytosol 37.68 39.51
Bra016726.1-P Field mustard cytosol 37.1 39.26
PGSC0003DMT400096724 Potato cytosol 37.39 39.21
CDX95244 Canola cytosol 37.97 39.1
AT1G13430.1 Thale cress nucleus 39.71 39.03
Bra005876.1-P Field mustard cytosol 36.81 38.96
CDY34562 Canola nucleus 29.57 38.93
CDY22189 Canola cytosol 37.68 38.92
Bra041015.1-P Field mustard cytosol 37.1 38.91
PGSC0003DMT400086700 Potato cytosol 37.1 38.91
Solyc05g047510.1.1 Tomato cytosol 37.1 38.91
VIT_13s0084g00380.t01 Wine grape cytosol 38.55 38.89
VIT_17s0000g04930.t01 Wine grape cytosol 32.17 38.81
CDX92759 Canola cytosol 34.78 38.71
OQU88195 Sorghum cytosol, plastid 38.26 38.71
CDY11350 Canola cytosol 36.52 38.65
AT3G45080.1 Thale cress nucleus 36.81 38.6
Solyc11g050930.1.1 Tomato cytosol 36.81 38.6
Solyc05g011870.1.1 Tomato cytosol 37.1 38.55
Bra004349.1-P Field mustard cytosol 36.52 38.53
CDY07562 Canola cytosol 31.59 38.52
PGSC0003DMT400072874 Potato cytosol 37.39 38.51
PGSC0003DMT400096856 Potato cytosol 36.81 38.48
Bra005878.1-P Field mustard nucleus 36.23 38.46
CDY34560 Canola cytosol 34.2 38.44
EER99682 Sorghum cytosol 37.97 38.42
AT1G28170.1 Thale cress cytosol 36.23 38.34
PGSC0003DMT400066060 Potato cytosol 34.2 38.31
PGSC0003DMT400014241 Potato cytosol 36.52 38.18
Bra010899.1-P Field mustard cytosol 35.94 38.15
CDY11746 Canola cytosol 35.94 38.15
EER97516 Sorghum cytosol 39.13 37.92
KRH45414 Soybean cytosol 36.81 37.91
OQU80904 Sorghum cytosol 46.67 37.88
CDX90128 Canola cytosol 35.65 37.85
CDY46907 Canola nucleus 27.83 37.65
CDX80984 Canola cytosol 33.91 37.62
CDY60367 Canola cytosol 35.94 37.58
AT2G14920.1 Thale cress cytosol 36.23 37.54
Bra005879.1-P Field mustard cytosol 34.2 37.46
CDY32052 Canola cytosol 35.65 37.39
Solyc03g114800.1.1 Tomato extracellular 34.2 37.34
CDY31830 Canola nucleus 26.67 37.1
CDY62444 Canola cytosol 22.9 37.09
CDY34679 Canola cytosol 35.36 37.08
Solyc09g055500.1.1 Tomato cytosol 35.65 37.05
CDY11352 Canola nucleus 35.65 36.94
KRH30105 Soybean cytosol 36.52 36.84
KRH20644 Soybean cytosol 36.52 36.63
PGSC0003DMT400072721 Potato cytosol 35.36 36.42
KRH13298 Soybean cytosol 24.35 36.36
Solyc05g011890.1.1 Tomato cytosol 35.36 36.31
CDX95240 Canola nucleus 29.57 36.3
PGSC0003DMT400008501 Potato cytosol 35.36 36.2
AT2G03750.1 Thale cress cytosol, golgi 36.81 36.18
AT3G45070.2 Thale cress endoplasmic reticulum, golgi 37.1 36.06
KRH20754 Soybean cytosol 33.91 36.0
KRH20753 Soybean cytosol 34.2 35.98
EES11148 Sorghum cytosol 35.94 35.73
EES02043 Sorghum cytosol 33.33 35.71
AT5G07000.1 Thale cress cytosol 35.65 35.45
CDY25540 Canola nucleus 27.83 35.29
Bra005921.1-P Field mustard cytosol, plastid 36.81 35.28
VIT_13s0106g00550.t01 Wine grape cytosol 35.07 35.28
CDY34676 Canola nucleus 22.9 35.27
EES08978 Sorghum cytosol 34.2 35.12
Solyc05g047490.1.1 Tomato cytosol 38.26 35.11
Bra009300.1-P Field mustard cytosol 35.65 35.04
CDY14059 Canola cytosol 37.1 34.78
AT5G07010.1 Thale cress cytosol 35.94 34.54
CDX81030 Canola cytosol 35.94 34.54
CDY58879 Canola cytosol 35.94 34.54
OQU84404 Sorghum cytosol 36.81 34.51
Bra028711.1-P Field mustard cytosol 36.23 34.34
KRH20646 Soybean cytosol 34.78 34.29
PGSC0003DMT400063308 Potato cytosol 34.78 34.29
CDY70313 Canola cytosol 35.65 33.88
CDY05012 Canola cytosol 35.94 33.7
Bra027666.1-P Field mustard cytosol 28.41 33.56
CDX99017 Canola cytosol 35.94 33.51
CDX80985 Canola nucleus 22.61 33.48
CDY61953 Canola cytosol 26.67 33.33
EES08824 Sorghum cytosol 33.33 32.95
OQU83741 Sorghum plastid 38.26 31.43
PGSC0003DMT400006072 Potato cytosol 32.46 31.2
VIT_04s0079g00220.t01 Wine grape cytosol 40.0 29.11
KXG29111 Sorghum cytosol 36.81 28.1
Bra034520.1-P Field mustard nucleus 22.03 26.86
Bra034521.1-P Field mustard cytosol 34.2 20.24
Protein Annotations
EnsemblPlants:EER91076EnsemblPlantsGene:SORBI_3001G136400EntrezGene:8056714Gene3D:3.40.50.300GO:GO:0003674GO:GO:0003824
GO:GO:0008146GO:GO:0016740InterPro:P-loop_NTPaseInterPro:Sulfotransferase_domPANTHER:PTHR11783PANTHER:PTHR11783:SF94
PFAM:PF00685ProteinID:EER91076ProteinID:EER91076.1RefSeq:XP_002464078.1SEG:segSUPFAM:SSF52540
UniParc:UPI0001A81F3FUniProt:C5WPM3MapMan:50.2.8:::
Description
hypothetical protein
Coordinates
chr1:+:10793376..10794957
Molecular Weight (calculated)
38223.5 Da
IEP (calculated)
6.229
GRAVY (calculated)
-0.256
Length
345 amino acids
Sequence
(BLAST)
001: MAQATASESG KSDTNTAASS ADEAQPQSYS DLVSTLPARG GWVSLVQYQN YWLNPGRLQH IIPVKELYKP RADDILLATY LKCGTTWLKA LAFAITTRGL
101: HHHHHHAGGA DDDDHPLLTV HPQEAVPHLE VHTPGRALAD IETLPSPRLL GTHLPLSLLP PAVASTCRRV VYLCRQPKDV FVSLWHFVNG MRGGRSPVAE
201: MDAALGMFCE GVSPFGPVWE HYLEYWKASL ARPEQVLFMR YEEMVADPVR AVKTLAGFFA VPFTEEEDRA GVPEEIVRLC SFETLSGLES NRTGDLDCGD
301: NTVIGKSTFF RKGKVGDWEN HMTREMGKKV DDVFEEKLKG SGLVF
Best Arabidopsis Sequence Match ( AT1G74090.1 )
(BLAST)
001: MESETLTAKA TITTTTLPSH DETKTESTEF EKNQKRYQDL ISTFPHEKGW RPKEPLIEYG GYWWLPSLLE GCIHAQEFFQ ARPSDFLVCS YPKTGTTWLK
101: ALTFAIANRS RFDDSSNPLL KRNPHEFVPY IEIDFPFFPE VDVLKDKGNT LFSTHIPYEL LPDSVVKSGC KMVYIWREPK DTFISMWTFL HKERTELGPV
201: SNLEESFDMF CRGLSGYGPY LNHILAYWKA YQENPDRILF LKYETMRADP LPYVKSLAEF MGHGFTAEEE EKGVVEKVVN LCSFETLKNL EANKGEKDRE
301: DRPGVYANSA YFRKGKVGDW SNYLTPEMAA RIDGLMEEKF KGTGLLEHGK
Arabidopsis Description
SOT18Sulfotransferase [Source:UniProtKB/TrEMBL;Acc:T1P4U2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.