CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032867_P002	Maize	mitochondrion, plastid	88.14	85.63
Os10t0442100-00	Rice	cytosol	66.72	71.22
TraesCS1D01G139800.1	Wheat	mitochondrion, plastid	67.8	65.77
HORVU1Hr1G036990.6	Barley	plastid	68.1	65.58
TraesCS1A01G140900.1	Wheat	plastid	67.49	65.47
TraesCS1B01G157400.1	Wheat	plastid	66.56	64.57
VIT_08s0040g01440.t01	Wine grape	cytosol	43.3	48.36
KRG93921	Soybean	cytosol	35.59	42.86
KRH18226	Soybean	cytosol	44.38	42.73
PGSC0003DMT400009906	Potato	cytosol, mitochondrion	29.28	41.58
Solyc09g008130.2.1	Tomato	cytosol	42.37	40.26
KXG20562	Sorghum	cytosol	14.02	22.69
KXG29557	Sorghum	cytosol	13.56	21.89
EES19743	Sorghum	plastid	15.87	21.33

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	Gene3D:3.40.50.1260	Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:8082961
UniProt:C5X0G8	EnsemblPlants:EER91565	ProteinID:EER91565	ProteinID:EER91565.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0006400
GO:GO:0008150	GO:GO:0008152	GO:GO:0008176	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0106004	InterPro:IPR003358	InterPro:IPR015824
PFAM:PF00162	PFAM:PF02390	PRINTS:PR00477	PFscan:PS51625	PANTHER:PTHR11406	PANTHER:PTHR11406:SF13
MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G236800	SUPFAM:SSF53335	SUPFAM:SSF53748
unigene:Sbi.20285	UniParc:UPI0001A81F5C	RefSeq:XP_002464567.1	InterPro:tRNA_(Gua-N-7)_MeTrfase_Trmb	:	:

Description

hypothetical protein

Coordinates

chr1:+:23942913..23952278

Molecular Weight (calculated)

72023.9 Da

IEP (calculated)

7.547

GRAVY (calculated)

0.019

Length

649 amino acids

Sequence
(BLAST)

001: MAAPAGFQVA MNSSYFLGGH GLSRLKCRVR CSQLQISTNS VHNKIEKDKY SYSDQSTSYL HVQSLRDFPT EKLSGEVVLV RLDSSLICGK LGPCSSSLER
101: ALLTIKYLCK ARAKVVIATS WDTVQSDNRV IESVGSFAEY LSSLLHVQVI PVDGEPGLTS FKQEEWAQNS IILFENLVNF RGEVANCKDF SQKLASGATI
201: FVNDSFSLSH KILASTVGIT CFCYASLGGF HFEEELMQLI KITDTTRRPY IAIIGGSNFL RKAPALQMLT SLCDGLFFVG KLSFQIMNGL GMTVPSRFIE
301: RSAVKEVLQI IQVARDRNIP IYYPTDLWCL KNDGSETLGV ISSTGQLAGW TPVDIGPSTL EKISSIIPSY EKILWIGPTN YNLTETFSVG GTQLGEIMEK
401: ASSDSCDVVL VGSAACKAIE RKTDSSSQYA EFQNATVVWE FLKGRILPGI AALDKCYPYR IPWSTVFFEP TLPLVVDIGS GNGLFLFQMA KSCESSNFLG
501: LEMNEKLVIR CLQGMTSDEK RNLYFVSTNA TSTFRSIVSS YPGRLTLVTI QCPNPDFNKE QNRWRMVRRM LVEAVVDLLH TNGQVYLQSD VESVLLVMKE
601: QFLSYSKGQL VIDGVSGHQI DNPFGVVSDW ERHVLARGAP MYRTMLKKV

Best Arabidopsis Sequence Match ( AT5G17660.1 )
(BLAST)

001: MASLCQACSS SSATPLLLAK RVFSLASSPF IFMREHKIPR HCNSFRAFNA VSASSSASTS VCVDFKDLRS NELVELEYAE LNLNHKISEE VGHVRIRQHV
101: NPLSSSFSKP APVPVWDEVY KDPSLPLMVD IGSGSGRFLL WQANKNVESR NYLGLEIRQK LVKRANFWVN ELGLSNVHFI FANAMVSFEH LISSYPGPLE
201: IVSILCPDPH FKKRHQKRRV VQKPLVNSIL QNLKPGGKIF VQSDVLDVAQ DMRDQLDEES NVLQHMDTVD TEDGWLTENP MGIRTEREIH AEFEGARIYR
301: RLYQKRQLLP ET

Arabidopsis Description

At5g17660 [Source:UniProtKB/TrEMBL;Acc:Q8L8R4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.