Factsheet for TraesCS1D01G139800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G140900.1	Wheat	plastid	97.46	97.46
TraesCS1B01G157400.1	Wheat	plastid	96.71	96.71
HORVU1Hr1G036990.6	Barley	plastid	95.67	94.96
Os10t0442100-00	Rice	cytosol	72.94	80.26
EER91565	Sorghum	plastid	65.77	67.8
Zm00001d032867_P002	Maize	mitochondrion, plastid	65.47	65.57
VIT_08s0040g01440.t01	Wine grape	cytosol	45.74	52.67
PGSC0003DMT400009906	Potato	cytosol, mitochondrion	31.69	46.39
KRH18226	Soybean	cytosol	45.44	45.1
KRG93921	Soybean	cytosol	36.17	44.9
Solyc09g008130.2.1	Tomato	cytosol	44.99	44.07
TraesCS7D01G460800.1	Wheat	cytosol	15.84	26.43
TraesCS6D01G148700.2	Wheat	cytosol	15.7	24.53
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	17.19	24.06
TraesCS7D01G460700.2	Wheat	cytosol	14.95	23.81

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	Gene3D:3.40.50.1260	Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0006400	GO:GO:0008150	GO:GO:0008152	GO:GO:0008176	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR003358	InterPro:IPR015824	PFAM:PF00162
PFAM:PF02390	PRINTS:PR00477	PFscan:PS51625	PANTHER:PTHR11406	PANTHER:PTHR11406:SF13	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF53748	EnsemblPlantsGene:TraesCS1D01G139800
EnsemblPlants:TraesCS1D01G139800.1	SEG:seg	InterPro:tRNA_(Gua-N-7)_MeTrfase_Trmb	:	:	:

Description

No Description!

Coordinates

chr1D:-:192583613..192592736

Molecular Weight (calculated)

74292.6 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.018

Length

669 amino acids

Sequence
(BLAST)

001: MQVCGVQLSS ATSRWRESWP PFGGSYECAG HSCCISGSQR PLCRVQCCQV PRSTGNVAHL QKEDKYSCVD RSTSYLHVQT LRNFPIEKLY GEVVLVRLDS
101: VLLLDPLGLS SCSLKRTLST IKYLYKAGGK VLLVTSWDPV LQSVNPVLKS TESFADYMSS LLQVKVIPVN GVPCLTSCKK EERVQNDIIL FENLLNFRGE
201: NANCNDFSQK LASGAAIFVN DSFSLSHKIR ASTVGITRFC YASLAGFHFE EELMQLLKIN DTTRRPYIAI IGGSNFLRKA PALHLLASQC DGLFLVGKLS
301: FQIMNGLGIP VSSCLIEKNA TKEVLQLIEI AHNRNIPIYY PTDLWCLNSN NNEQLEIFDS AELLSGLISL GWTPVDIGPS TLERISSLLS SYKKILWIGP
401: TSFDLTEEFS VGATQLGQIL NKASHNSCDI ILVGGAACKA VKGMSDSSSQ YTASENESIV WEFLKGRILP GIAALDKSYP YQIPWDDVFS DTTQPLFVDI
501: GSGNGLFLFQ MARNWEGLNF LGLEMNEKLV VRCLQDVASA GKRNLYFLST NATSTFRSIV SSYPGQLTLV SIQCPNPDFN KEQNRWRMVR RMLVEAVADL
601: LQVNGKIYLQ SDVESVLLGM KEQFISHGKG QLVVDSDGRM ENPFGVVSDW ERHVLARGAP MYRTMLRKV

Best Arabidopsis Sequence Match ( AT3G12780.1 )
(BLAST)

001: MASAAASSAF SLLKSTGAVA SSAGTRARAS LLPIPSTSVS ARPLGFSATL DSRRFSLHVA SKVESVRGKG SRGVVSMAKK SVGDLTSADL KGKKVFVRAD
101: LNVPLDDNQT ITDDTRIRAA IPTIKYLIEN GAKVILSTHL GRPKGVTPKF SLAPLVPRLS ELLGIEVTKA DDCIGPEVES LVASLPEGGV LLLENVRFYK
201: EEEKNDPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSNPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATELL AKAKAKGVSL LLPTDVVVAD KFAPDANSKI VPASGIEDGW MGLDIGPDSI KTFNEALDTT QTVIWNGPMG
401: VFEMEKFAAG TEAIANKLAE LSEKGVTTII GGGDSVAAVE KVGVAGVMSH ISTGGGASLE LLEGKVLPGV IALDEAIPVT V

Arabidopsis Description

PGK1Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178V5M8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.