Factsheet for TraesCS6D01G148700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G187500.2	Wheat	golgi	93.22	99.5
TraesCS6A01G158300.1	Wheat	cytosol	93.22	99.5
Zm00001d015376_P002	Maize	cytosol	86.92	92.54
KXG29557	Sorghum	cytosol	86.22	91.79
Os02t0169300-01	Rice	extracellular, plasma membrane	85.98	91.54
TraesCS7D01G460800.1	Wheat	cytosol	82.71	88.28
Bra008421.1-P	Field mustard	cytosol	81.54	87.03
AT1G79550.2	Thale cress	cytosol	81.54	87.03
Bra035124.1-P	Field mustard	cytosol	81.54	87.03
KRH13759	Soybean	mitochondrion	67.76	86.31
GSMUA_Achr11P...	Banana	cytosol	80.37	85.79
GSMUA_Achr5P00330_001	Banana	cytosol	80.37	85.79
GSMUA_Achr1P25780_001	Banana	cytosol	80.14	85.54
Bra003605.1-P	Field mustard	cytosol	79.67	85.04
VIT_19s0085g00370.t01	Wine grape	cytosol	79.67	85.04
PGSC0003DMT400056871	Potato	cytosol	79.67	85.04
GSMUA_Achr8P33470_001	Banana	cytosol	79.67	85.04
Solyc07g066600.2.1	Tomato	nucleus, plastid	79.44	84.79
TraesCS7D01G460700.2	Wheat	cytosol	79.21	80.71
KRH13758	Soybean	peroxisome	11.92	78.46
HORVU6Hr1G031830.4	Barley	plasma membrane	92.99	72.89
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	76.87	68.83
CDX79325	Canola	cytosol	50.47	64.67
TraesCS1D01G139800.1	Wheat	mitochondrion, plastid	24.53	15.7

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	ScanProsite:PS00111
PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf
SUPFAM:SSF53748	EnsemblPlantsGene:TraesCS6D01G148700	EnsemblPlants:TraesCS6D01G148700.2	TIGR:cd00318	SEG:seg	:

Description

No Description!

Coordinates

chr6D:+:122253755..122256620

Molecular Weight (calculated)

45140.1 Da

IEP (calculated)

5.557

GRAVY (calculated)

0.202

Length

428 amino acids

Sequence
(BLAST)

001: MATKRSVGTL GEADLKGKKV FVRADLNVPL DDAQKITDDT RIRASIPTIK YLLEKGAKVI LASHLGRPKG VTPKFSLKPL VPRLSELLGL EVVMAPDCIG
101: EEVEKLAAAL PDGGVLLLEN VRFYKEEEKN DPEFAKKLAS VADLYVNDAF GTAHRAHAST EGVTKFLMPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSSKIGVI ESLLAKVDIL ILGGGMIFTF YKAQGLAVGK SLVEEDKLEL ATSLIETAKS KGVKLLLPTD VVVADKFAAD AESKIVPATA IPDGWMGLDV
301: GPDSIKTFAE ALDTTKTVIW NGPMGVFEFE KFAAGTDVST ISHKCTFIYL VFVVVANDNC PFSQAIAKQL AELTGKGVTT IIGGGDSVAA VEKAGLADKM
401: SHISTGGGAS LELLEGKPLP GVLALDEA

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.