CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13758	Soybean	peroxisome	15.87	81.54
HORVU7Hr1G108230.3	Barley	cytosol, mitochondrion, peroxisome	58.38	68.42
CDX79326	Canola	cytosol	69.46	65.72
CDX88547	Canola	cytosol	68.26	64.77
CDX67989	Canola	cytosol	67.37	64.66
CDX87375	Canola	cytosol	73.65	61.35
CDY70232	Canola	cytosol	73.65	61.35
CDY49746	Canola	plastid	68.86	59.28
GSMUA_Achr1P25780_001	Banana	cytosol	65.27	54.36
KXG29557	Sorghum	cytosol	65.27	54.23
Zm00001d015376_P002	Maize	cytosol	64.97	53.98
GSMUA_Achr8P33470_001	Banana	cytosol	64.67	53.87
KXG20562	Sorghum	cytosol	64.67	53.87
Os02t0169300-01	Rice	extracellular, plasma membrane	64.67	53.73
TraesCS6B01G187500.2	Wheat	golgi	64.37	53.62
TraesCS6A01G158300.1	Wheat	cytosol	64.37	53.62
Os06t0668200-01	Rice	nucleus, plasma membrane	64.37	53.62
GSMUA_Achr11P...	Banana	cytosol	63.77	53.12
GSMUA_Achr5P00330_001	Banana	cytosol	63.47	52.87
TraesCS7D01G460800.1	Wheat	cytosol	63.17	52.62
TraesCS7B01G375300.1	Wheat	cytosol	62.87	52.37
TraesCS6D01G148700.2	Wheat	cytosol	64.67	50.47
KRH13759	Soybean	mitochondrion	50.0	49.7
TraesCS7D01G460700.2	Wheat	cytosol	62.28	49.52
TraesCS7A01G473900.1	Wheat	cytosol	62.57	49.18
CDY00798	Canola	plastid	62.87	43.57
CDY43401	Canola	plastid	62.57	43.54
CDX73803	Canola	plastid	62.87	43.39
CDY24247	Canola	plastid	62.28	43.24
HORVU6Hr1G031830.4	Barley	plasma membrane	64.07	39.19
HORVU4Hr1G055460.8	Barley	cytosol	35.93	32.43
CDY52872	Canola	cytosol	61.98	25.97
TraesCS5A01G113800.1	Wheat	cytosol	6.89	14.84
TraesCS7B01G381700.1	Wheat	cytosol	6.89	14.84

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	Gene3D:3.40.50.1260	MapMan:35.1	GO:A0A078CR36	EnsemblPlants:CDX79325
ProteinID:CDX79325	ProteinID:CDX79325.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00132003001	InterPro:IPR015824
PFAM:PF00162	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	MetaCyc:PWY-1042	MetaCyc:PWY-5484
MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf
SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EDE79F	SEG:seg	:	:

Description

BnaC06g19780D

Coordinates

chrLK031817:-:1361877..1365536

Molecular Weight (calculated)

36190.0 Da

IEP (calculated)

9.984

GRAVY (calculated)

-0.054

Length

334 amino acids

Sequence
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVSVDLSVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVL LCSHLGRRVT PKFSLKILVP RLSELLGVEV VMANNSIGEE
101: VQKLVAALPE GGVLLLENVR FYKEEEKNDP EFAKKLAALA DLYELDYLVR AVANPKKPFA AIVGGSKVST KIGVIESLLS TVDILLLGGG MIYTFYKAQG
201: HAVGSSLLEE DKLDLARSLM EKAKSKGVSL LLPTDVVIAD KFAPDANSKS YNSRKLTTDL RLHTPQKRYS GGVSYIKTTT TTVVYGKALP TSPHLFTSSP
301: SVFSSRAQAL HRSSLSPLFK LRRPAVNGCE EAPP

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.