Factsheet for TraesCS5A01G113800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G381700.1	Wheat	cytosol	94.84	94.84
KRH13758	Soybean	peroxisome	11.61	27.69
Os06t0668200-01	Rice	nucleus, plasma membrane	21.94	8.48
KXG20562	Sorghum	cytosol	21.29	8.23
TraesCS7A01G473900.1	Wheat	cytosol	21.29	7.76
PGSC0003DMT400056871	Potato	cytosol	20.0	7.73
VIT_19s0085g00370.t01	Wine grape	cytosol	19.35	7.48
TraesCS6A01G158300.1	Wheat	cytosol	19.35	7.48
Solyc07g066600.2.1	Tomato	nucleus, plastid	19.35	7.48
GSMUA_Achr5P00330_001	Banana	cytosol	18.06	6.98
GSMUA_Achr1P25780_001	Banana	cytosol	18.06	6.98
Bra008421.1-P	Field mustard	cytosol	18.06	6.98
AT1G79550.2	Thale cress	cytosol	18.06	6.98
CDX79325	Canola	cytosol	14.84	6.89
GSMUA_Achr8P33470_001	Banana	cytosol	17.42	6.73
GSMUA_Achr11P...	Banana	cytosol	17.42	6.73
Bra003605.1-P	Field mustard	cytosol	17.42	6.73
Bra035124.1-P	Field mustard	cytosol	16.13	6.23
TraesCS1A01G313300.1	Wheat	plastid	18.71	6.07
KRH13759	Soybean	mitochondrion	7.1	3.27
TraesCS2A01G539200.1	Wheat	cytosol	3.87	2.29
TraesCS1A01G140900.1	Wheat	plastid	7.1	1.64

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	Gene3D:3.40.50.1260	MapMan:35.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
InterPro:IPR015824	PFAM:PF00162	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_N
InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	EnsemblPlantsGene:TraesCS5A01G113800	EnsemblPlants:TraesCS5A01G113800.1	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:226793744..226795845

Molecular Weight (calculated)

16538.3 Da

IEP (calculated)

8.387

GRAVY (calculated)

0.203

Length

155 amino acids

Sequence
(BLAST)

001: MATKRSVGTP GPQGPQEQNV FLRADLNILL DDDRNITEDN RIRASVPSVP FLKFLMGKAA KVILANNLWL LPLATPHLPA RSPLAVGPCP PASPVVHGAR
101: PGSVCPPPSC CSLVAPIIQP LVWRTAVCLY LLDVGSNTTG WPCRAFISDL TDLGL

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.