Factsheet for VIT_19s0085g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43698	Soybean	endoplasmic reticulum, nucleus	91.77	91.77
Solyc07g066600.2.1	Tomato	nucleus, plastid	90.52	90.52
PGSC0003DMT400056871	Potato	cytosol	90.52	90.52
GSMUA_Achr8P33470_001	Banana	cytosol	90.27	90.27
GSMUA_Achr1P25780_001	Banana	cytosol	89.78	89.78
GSMUA_Achr11P...	Banana	cytosol	88.53	88.53
AT1G79550.2	Thale cress	cytosol	88.03	88.03
CDX87375	Canola	cytosol	88.03	88.03
Bra035124.1-P	Field mustard	cytosol	87.78	87.78
Bra008421.1-P	Field mustard	cytosol	87.78	87.78
CDY70232	Canola	cytosol	87.28	87.28
GSMUA_Achr5P00330_001	Banana	cytosol	87.28	87.28
CDX88547	Canola	cytosol	75.81	86.36
Os06t0668200-01	Rice	nucleus, plasma membrane	86.28	86.28
KXG20562	Sorghum	cytosol	86.03	86.03
KXG29557	Sorghum	cytosol	86.03	85.82
Zm00001d015376_P002	Maize	cytosol	85.79	85.57
CDX67989	Canola	cytosol	74.06	85.34
Bra003605.1-P	Field mustard	cytosol	85.29	85.29
TraesCS6A01G158300.1	Wheat	cytosol	85.04	85.04
CDX79326	Canola	cytosol	74.81	84.99
Os02t0169300-01	Rice	extracellular, plasma membrane	85.04	84.83
TraesCS7D01G460800.1	Wheat	cytosol	82.79	82.79
HORVU7Hr1G108230.3	Barley	cytosol, mitochondrion, peroxisome	57.11	80.35
TraesCS6D01G148700.2	Wheat	cytosol	85.04	79.67
CDY49746	Canola	plastid	75.56	78.09
TraesCS7A01G473900.1	Wheat	cytosol	82.04	77.41
TraesCS7D01G460700.2	Wheat	cytosol	78.8	75.24
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	84.04	70.5
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	21.95	63.31
HORVU6Hr1G031830.4	Barley	plasma membrane	84.54	62.09
HORVU4Hr1G055460.8	Barley	cytosol	39.15	42.43
TraesCS5A01G113800.1	Wheat	cytosol	7.48	19.35
VIT_08s0040g01440.t01	Wine grape	cytosol	26.43	18.24

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	EntrezGene:100244419	wikigene:100244419	MapMan:2.1.1.5	Gene3D:3.40.50.1260
UniProt:A5CAF6	EMBL:AM488092	ProteinID:CAN81988	ProteinID:CAN81988.1	ProteinID:CCB49007	ProteinID:CCB49007.1
EMBL:FN595503	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005488
GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR015824	EntrezGene:LOC100244419	wikigene:LOC100244419	HAMAP:MF_00145	PFAM:PF00162
PIRSF:PIRSF000724	PRINTS:PR00477	ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	TIGR:TC52072	UniParc:UPI0001524EB7
ArrayExpress:VIT_19s0085g00370	EnsemblPlantsGene:VIT_19s0085g00370	EnsemblPlants:VIT_19s0085g00370.t01	unigene:Vvi.39	RefSeq:XP_002263950	RefSeq:XP_002263950.1
SEG:seg	:	:	:	:	:

Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A5CAF6]

Coordinates

chr19:-:22723034..22727606

Molecular Weight (calculated)

42424.8 Da

IEP (calculated)

6.697

GRAVY (calculated)

0.106

Length

401 amino acids

Sequence
(BLAST)

001: MATKRSVGDL KEADLKGKRV FVRVDLNVPL DESLKITDDT RVRAAVPTIK YLMGHGAKVI LASHLGRPKG VTPKYSLKPL VPRLSELLGV EVKMANDCIG
101: EEVKILVAKI PEGGVLLLEN VRFYKEEEKN DPEFAKKLAS LADLYVNDAF GTAHRAHAST EGVAKYLKPS VAGFLMQKEL DYLVGAVSNP KRPFAAIVGG
201: SKVSSKIGVI ESLLGKVDVL LLGGGMIFTF YKAQGYGVGS SLVEEDKLDL ATSLLEKAKS KGVSLLLPAD VVIADKFAAD ANSKVVPASC IPDGWMGLDI
301: GPDSIKTFGE SLDTTKTIIW NGPMGVFEFD KFALGTEAIA KKLADLSEKG VTTIIGGGDS VAAVEKVGLA EKMSHISTGG GASLELLEGK TLPGVLALDD
401: A

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.