Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
nucleus: 25464976 plastid: 26371478 unclear: 26455813 nucleus: 28394025 endoplasmic reticulum: 29145071 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400056871 | Potato | cytosol | 99.0 | 99.0 |
VIT_19s0085g00370.t01 | Wine grape | cytosol | 90.52 | 90.52 |
KRH43698 | Soybean | endoplasmic reticulum, nucleus | 90.27 | 90.27 |
AT1G79550.2 | Thale cress | cytosol | 89.03 | 89.03 |
CDX87375 | Canola | cytosol | 89.03 | 89.03 |
Bra035124.1-P | Field mustard | cytosol | 88.78 | 88.78 |
Bra008421.1-P | Field mustard | cytosol | 88.53 | 88.53 |
CDX88547 | Canola | cytosol | 77.31 | 88.07 |
CDY70232 | Canola | cytosol | 88.03 | 88.03 |
GSMUA_Achr11P... | Banana | cytosol | 88.03 | 88.03 |
CDX67989 | Canola | cytosol | 75.81 | 87.36 |
CDX79326 | Canola | cytosol | 76.81 | 87.25 |
Bra003605.1-P | Field mustard | cytosol | 87.03 | 87.03 |
GSMUA_Achr1P25780_001 | Banana | cytosol | 87.03 | 87.03 |
GSMUA_Achr8P33470_001 | Banana | cytosol | 87.03 | 87.03 |
GSMUA_Achr5P00330_001 | Banana | cytosol | 86.28 | 86.28 |
KXG29557 | Sorghum | cytosol | 85.79 | 85.57 |
Zm00001d015376_P002 | Maize | cytosol | 85.54 | 85.32 |
KXG20562 | Sorghum | cytosol | 85.04 | 85.04 |
TraesCS6A01G158300.1 | Wheat | cytosol | 84.54 | 84.54 |
Os02t0169300-01 | Rice | extracellular, plasma membrane | 84.54 | 84.33 |
Os06t0668200-01 | Rice | nucleus, plasma membrane | 83.54 | 83.54 |
TraesCS7D01G460800.1 | Wheat | cytosol | 81.8 | 81.8 |
CDY49746 | Canola | plastid | 77.06 | 79.64 |
TraesCS6D01G148700.2 | Wheat | cytosol | 84.79 | 79.44 |
HORVU7Hr1G108230.3 | Barley | cytosol, mitochondrion, peroxisome | 56.36 | 79.3 |
TraesCS7A01G473900.1 | Wheat | cytosol | 81.05 | 76.47 |
TraesCS7D01G460700.2 | Wheat | cytosol | 77.31 | 73.81 |
Solyc07g066610.2.1 | Tomato | plastid | 84.79 | 70.54 |
TraesCS1B01G104200.1 | Wheat | mitochondrion, peroxisome | 23.19 | 66.91 |
HORVU6Hr1G031830.4 | Barley | plasma membrane | 84.54 | 62.09 |
HORVU4Hr1G055460.8 | Barley | cytosol | 39.15 | 42.43 |
TraesCS5A01G113800.1 | Wheat | cytosol | 7.48 | 19.35 |
Solyc09g008130.2.1 | Tomato | cytosol | 27.43 | 16.11 |
Protein Annotations
KEGG:00010+2.7.2.3 | KEGG:00710+2.7.2.3 | MapMan:2.1.1.5 | Gene3D:3.40.50.1260 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004618 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005975 | GO:GO:0006091 |
GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR015824 | UniProt:K4CHY3 |
HAMAP:MF_00145 | PFAM:PF00162 | PIRSF:PIRSF000724 | PRINTS:PR00477 | ScanProsite:PS00111 | PANTHER:PTHR11406 |
PANTHER:PTHR11406:SF11 | InterPro:Phosphoglycerate_kinase | InterPro:Phosphoglycerate_kinase_CS | InterPro:Phosphoglycerate_kinase_N | InterPro:Phosphoglycerate_kinase_sf | SUPFAM:SSF53748 |
EnsemblPlantsGene:Solyc07g066600.2 | EnsemblPlants:Solyc07g066600.2.1 | UniParc:UPI000276B49A | : | : | : |
Description
Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:K4CHY3]
Coordinates
chr7:-:67982104..67985084
Molecular Weight (calculated)
42291.5 Da
IEP (calculated)
5.851
GRAVY (calculated)
0.104
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKKSVGSL KEADLKGKRV FVRVDLNVPL DDNFKITDDT RIRAAVPTIK YLMQNGARVI LASHLGRPKG VTPKYSLKPL VPRLSELLGI EVKMANDSVG
101: PEVENLVAGL PEGGVVLLEN VRFYKEEEKN DPEFAKKLAS LADLYVNDAF GTAHRAHAST EGVAKVLKPA VAGFLMQKEL DYLVGAVSNP QKPFAAIVGG
201: SKVSSKIGVI ESLLEKVDVL LLGGGMIFTF YKAQGYAVGS SLVEEDKLDL ATSLMEKAKT KGVSLLLPTD VVIADKFAAD ANSKIVPASE IPDGWMGLDI
301: GPDAIKSFGS ALDTTKTIIW NGPMGVFEFD KFAAGTEAIA KKLAELSGKG VTTIIGGGDS VAAVEKVGLA EKMSHISTGG GASLELLEGK QLPGVLALDD
401: A
101: PEVENLVAGL PEGGVVLLEN VRFYKEEEKN DPEFAKKLAS LADLYVNDAF GTAHRAHAST EGVAKVLKPA VAGFLMQKEL DYLVGAVSNP QKPFAAIVGG
201: SKVSSKIGVI ESLLEKVDVL LLGGGMIFTF YKAQGYAVGS SLVEEDKLDL ATSLMEKAKT KGVSLLLPTD VVIADKFAAD ANSKIVPASE IPDGWMGLDI
301: GPDAIKSFGS ALDTTKTIIW NGPMGVFEFD KFAAGTEAIA KKLAELSGKG VTTIIGGGDS VAAVEKVGLA EKMSHISTGG GASLELLEGK QLPGVLALDD
401: A
001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A
Arabidopsis Description
PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.