Factsheet for TraesCS1B01G104200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67989	Canola	cytosol	68.35	27.3
CDX79326	Canola	cytosol	68.35	26.91
CDX88547	Canola	cytosol	66.19	26.14
TraesCS6B01G187500.2	Wheat	golgi	74.1	25.69
CDY49746	Canola	plastid	67.63	24.23
Bra008421.1-P	Field mustard	cytosol	69.06	23.94
Bra003605.1-P	Field mustard	cytosol	68.35	23.69
CDY70232	Canola	cytosol	68.35	23.69
AT1G79550.2	Thale cress	cytosol	68.35	23.69
Bra035124.1-P	Field mustard	cytosol	67.63	23.44
CDX87375	Canola	cytosol	66.91	23.19
PGSC0003DMT400056871	Potato	cytosol	66.91	23.19
Solyc07g066600.2.1	Tomato	nucleus, plastid	66.91	23.19
KRH43698	Soybean	endoplasmic reticulum, nucleus	66.19	22.94
TraesCS7B01G375300.1	Wheat	cytosol	65.47	22.69
VIT_19s0085g00370.t01	Wine grape	cytosol	63.31	21.95
TraesCS1B01G325100.1	Wheat	golgi	61.87	15.14
TraesCS7B01G381700.1	Wheat	cytosol	5.76	5.16
TraesCS1B01G157400.1	Wheat	plastid	18.7	3.89

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	Gene3D:3.40.50.1260	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
InterPro:IPR015824	PFAM:PF00162	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	EnsemblPlantsGene:TraesCS1B01G104200	EnsemblPlants:TraesCS1B01G104200.1	SEG:seg

Description

No Description!

Coordinates

chr1B:+:114686573..114687445

Molecular Weight (calculated)

14505.5 Da

IEP (calculated)

5.049

GRAVY (calculated)

0.229

Length

139 amino acids

Sequence
(BLAST)

001: MLYMGIGVVD GGGSSSSSTP LLLLQQYARL RVAHPSWQLT VQRQVAKIVP ATAIPDGWMG LDVGPDCIKT FAEALDTAKT VIWNGPMGVF EFEKFSAGTD
101: AIAKQLAELT GKGVTTIIGG GDSVAAVEKA GLADNMSHI

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.