CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008421.1-P	Field mustard	cytosol	99.5	99.5
CDX87375	Canola	cytosol	98.25	98.25
CDX88547	Canola	cytosol	85.79	97.73
AT1G79550.2	Thale cress	cytosol	97.26	97.26
CDX67989	Canola	cytosol	83.79	96.55
CDX79326	Canola	cytosol	84.29	95.75
CDY49746	Canola	plastid	87.03	89.95
KRH43698	Soybean	endoplasmic reticulum, nucleus	88.78	88.78
PGSC0003DMT400056871	Potato	cytosol	88.53	88.53
Solyc07g066600.2.1	Tomato	nucleus, plastid	88.03	88.03
VIT_19s0085g00370.t01	Wine grape	cytosol	87.28	87.28
CDX79325	Canola	cytosol	61.35	73.65
CDY00798	Canola	plastid	83.79	69.71
CDX73803	Canola	plastid	83.79	69.42
CDY43401	Canola	plastid	83.04	69.38
CDY24247	Canola	plastid	82.79	69.02
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	23.69	68.35
CDY52872	Canola	cytosol	75.06	37.77

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	GO:A0A078JX92	UniProt:A0A078JX92
EnsemblPlants:CDY70232	ProteinID:CDY70232	ProteinID:CDY70232.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00097384001	InterPro:IPR015824	HAMAP:MF_00145
PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	MetaCyc:PWY-1042
MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_N
InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EEAE47	:	:

Description

BnaC02g46710DPhosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078JX92]

Coordinates

chrLK041551:+:989..3292

Molecular Weight (calculated)

42191.1 Da

IEP (calculated)

5.185

GRAVY (calculated)

0.104

Length

401 amino acids

Sequence
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKFSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKYLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLSTVDIL LLGGGMIFTF YKAQGHSVGS SLVEEDKLDL AKSLMEKAEA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDV
301: GPDSIKTFSE ALDTTQTIIW NGPMGVFEFE KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VASVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDD
401: A

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.